Gene Ajs_1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1906 
Symbol 
ID4672112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1996105 
End bp1997325 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content66% 
IMG OID639838987 
Productradical SAM domain-containing protein 
Protein accessionYP_986162 
Protein GI121594266 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.9961 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCGCA TCAGCCAGTA CCTGCGTGAA CTCGCCCAGG CCCAAGCCAC CGGAACCTAC 
CCCACTTCGC GCGAACGGCA CGCGCGCGGC CCCGTGGTCA TCTGGAACCT GATCCGGCGC
TGCAACCTCA CCTGCAAGCA CTGCTACGCG CTCTCGGCCG ACCACGACTA CGCTGGAGAG
CTGTCGTTGC AAGAGGTGTA CACCGTCATG GACGACCTCA AGGCCTTCGG CGTGCCTGCG
CTCATCCTCT CGGGCGGTGA GCCACTGCTG CGCCCCGACC TCTTCGAGAT CGCGGCGCGC
GCGCGTGACC TGGGCTTCTA TACCGGCCTT TCGACCAACG GCACGCTGAT CGACGCGCCC
ATGGCCGCGC GCATCGCGGG CGCAGGCTTC GACTACGTGG GCATCAGCCT GGATGGCCTG
AAGCCCACGC ACGACAAGTT CCGCCGTCTG GACGGTGCGT TCGACCGCAG CCTGGCCGCC
ATCCGCCACC TGGCCACGCA CAACGTCAAG GTGGGCCTGC GCTTCACCAT GACAGCGCTG
AATGCACACG ATCTGCCCGC GCTGTTGCAG CTCATGAAGG ACGAGGGCGC CAACAAGTTC
TATTTCTCGC ACCTGAACTA CGCGGGGCGT GGCAACATCC ACCGCGACAA GGACGCGCAC
CACCAGGCCA CACGCCAGGC CATGGACCTG CTGTTCAACC ACGCCTGGGC CGATGCCCAG
GCCGGCAGCC TGGACGACTA CGTGAGCGGC AACAACGATG CCGACGGCCC CTATTTGCTG
CAATGGGCGC GCGAGCACCT GCCGCAATGG GAAGACGCCT TGCGCCAGCG CCTGGTGGCC
TGGGGCGGCA ATGCCAGCGG CCAGATGGTG GCCAATATCG ACAACCTGGG CCATGTGCAC
CCCGACACCA TGTGGTGGCA CCACGACCTG GGCAGCGTGC GCGAACGGCC CTTCTCGCAG
ATCTGGAACG ACACCAGCGA CCCGCTCATG GCGGGGCTCA AGCAGCACCC GCGCCCTGTC
CAGGGCCGCT GCGCCGGTTG CCAGTACCTC ACGATCTGCA ATGGCAACAC CCGCGTGCGC
GCACAGCAGC TCACGGGCAA CCCCTGGTTC GAGGACCCCG GCTGCTACCT CACCGATGCC
GAAGTGGGCG CATCCAGCAC GCCCTTCGAA TCCCCTGCCA AGCATGAGCG CCGTCGCACG
ATCGAGATTG CCCATGCGTA A
 
Protein sequence
MFRISQYLRE LAQAQATGTY PTSRERHARG PVVIWNLIRR CNLTCKHCYA LSADHDYAGE 
LSLQEVYTVM DDLKAFGVPA LILSGGEPLL RPDLFEIAAR ARDLGFYTGL STNGTLIDAP
MAARIAGAGF DYVGISLDGL KPTHDKFRRL DGAFDRSLAA IRHLATHNVK VGLRFTMTAL
NAHDLPALLQ LMKDEGANKF YFSHLNYAGR GNIHRDKDAH HQATRQAMDL LFNHAWADAQ
AGSLDDYVSG NNDADGPYLL QWAREHLPQW EDALRQRLVA WGGNASGQMV ANIDNLGHVH
PDTMWWHHDL GSVRERPFSQ IWNDTSDPLM AGLKQHPRPV QGRCAGCQYL TICNGNTRVR
AQQLTGNPWF EDPGCYLTDA EVGASSTPFE SPAKHERRRT IEIAHA