| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1905 |
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| Symbol | |
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| ID | 4672705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1994412 |
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| End bp | 1996040 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639838986 |
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| Product | cytochrome d1, heme region |
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| Protein accession | YP_986161 |
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| Protein GI | 121594265 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.275872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.619697 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATACCG CCGCGGCGAA GCGGCCCTTG CGCGGCAGCC GCTGGTCTGG GCCGAGCCGT
TATCTGGCGG CCTTGGGTCT GTTTTGGCTC GCGGGCCTGC ACGCCCAAAC CACCGAAGCC
CTCCAGCCCA ACGCCCCCGC CCTGTACCAG CAGCACTGCG CTGTATGCCA CGGCGCGCAG
CGCACCGGCA TCATGGGCCC CGCGCTGCTG CCCGAGAGCC TGGAGCGTGT GCGCCCCGCC
GAGGTGTTGC GCGTCATCCA GCAAGGGCGC CCCGCCACCC AGATGCCCGG GTTCTCCGAG
CAGTTGGGCG ACGCGGAGAT TCGCGCCCTG GCCGCGTGGG TACGTACCCC CGTGGTGCCC
GCGCCGCGCT GGGGCGAGGA CGATATCCGG GCGTCACGCA CGTTCACGCC CGTGCCCGAC
GATGAGCCCG CCAAGCCGAA GTGGAACGCA GACCCGATGA ACCTCTTCCT CGTCGTGGAA
GGAGGCGACC ACCATGTCTC GCTGCTCGAC GGCGACCGCT TCGAGGTCAT CACGCGCTTT
GCCAGCCGCT ATGCGCTGCA TGGCGGTCCC AAGTTCACGC CGGACGGGCG CTACGTGTTC
TTCGGTTCGC GCGACGGCTG GATCACCAAA TACGACCTGT GGCGCCTGCG CGTGGTGGCC
GAGGTGCGCG CGGGCCTGAA CATGCGCAAC GTGGCCGTGA GCGGCGACGG GCGCTGGGTG
ATGGCCGCCA ACTACCTGCC CCACACGCTG GCGCTGTTCG ATGCCGATCT GAACCTCGTG
CAGACATACG CCGCAGCCAC GCTCGACGGC AAGGCGAGTT CACGCGTTTC GGCCGTGTAC
GACGCCACGC CGCGCAAGAG CTTTGTGGTG GCGCTCAAGG ACATCCCCGA GCTCTGGGAA
ATCTCGTACG ACCGGAACGC GGCCCCCATC TACGATGGTC TGGTGCACGA CTACAAGATG
GGAGAGGCCA TCGCCAAGCC CGGCTACCTG GGCGTGCGGC GTACCCCCCT GAGCGAGCCG
CTGGACGACT TCTTCTTCGA CCAGTCCTAC CGCCACGTAC TCGGCGCCAC GCGCCCGCGC
AGTGGCGCCG ACGAACGCGC AAGCGCGCAG GTCGTAAACC TGGACATCCG GCGCAAGGTG
GCCGATCTGC CCATCGCCGG CATGCCGCAC CTGGGCTCGG GCATCACCTT CGCCTGGGGC
GACACCACTG TGCTGGCCAG CCCCAACCTG GGCGGCGGGG CCGTGGACGT CATCGACATG
CAGACCTGGA AGACGGTACG CACCATCGCC ACGCCCGGCC CGGGTTTCTT CATGCGCAGC
CATGAGGACA CGCCCTACGC CTGGACCGAC TCCATGATGA GCCCCACGGC CAAGGACACT
CTGACCATCA TCGACAAGCG CACGCTGCAG CCGGTGGCCC AGGTGCGCGA GCCCGGCAAG
ACGCTGGCGC ACATCGAGTT CACCCGCGAT GGCCGCTACG CCCTCGCCAG TGTCTGGGAA
ATGGACGGCG CCCTGGTGGT CTACGACGCC GCCACCTTCA AGGAAGTCAA GCGCCTGCCC
ATGAAAAAGC CCGTGGGGAA ATACAACGTC TGGAACAAGA TCACCCGCAG TGAGGGCACA
TCGCACTGA
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| Protein sequence | MDTAAAKRPL RGSRWSGPSR YLAALGLFWL AGLHAQTTEA LQPNAPALYQ QHCAVCHGAQ
RTGIMGPALL PESLERVRPA EVLRVIQQGR PATQMPGFSE QLGDAEIRAL AAWVRTPVVP
APRWGEDDIR ASRTFTPVPD DEPAKPKWNA DPMNLFLVVE GGDHHVSLLD GDRFEVITRF
ASRYALHGGP KFTPDGRYVF FGSRDGWITK YDLWRLRVVA EVRAGLNMRN VAVSGDGRWV
MAANYLPHTL ALFDADLNLV QTYAAATLDG KASSRVSAVY DATPRKSFVV ALKDIPELWE
ISYDRNAAPI YDGLVHDYKM GEAIAKPGYL GVRRTPLSEP LDDFFFDQSY RHVLGATRPR
SGADERASAQ VVNLDIRRKV ADLPIAGMPH LGSGITFAWG DTTVLASPNL GGGAVDVIDM
QTWKTVRTIA TPGPGFFMRS HEDTPYAWTD SMMSPTAKDT LTIIDKRTLQ PVAQVREPGK
TLAHIEFTRD GRYALASVWE MDGALVVYDA ATFKEVKRLP MKKPVGKYNV WNKITRSEGT
SH
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