Gene Ajs_1901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1901 
Symbol 
ID4671835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1991581 
End bp1992405 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content66% 
IMG OID639838982 
Productiojap-like protein 
Protein accessionYP_986157 
Protein GI121594261 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.151802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.412442 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTT CCAGCAAATC GGAAACCGCC GCCAAGAAAG ACGTCACCAA GCTCCAGCGC 
GCCATCGTCG ATGGCCTGGA AGACGTCAAG GCGCAAGACA TCCAGGTCTT CAACACCGAG
CATCTCTCGC CGCTGTTCGA GCGCGTGGTC GTCGCCACCG GCAGCTCCAA CCGCCAGACC
AAGGCGCTGG CCGCCAGCGT GCGCGACGCC GTGCGCAAGG CCGGGTTCCC CAAGCCGCGC
AGCGAGGGCG AGGACAACGG AGAATGGATC ATCGTGGACT GCGGCCAGGC CGTGGTGCAT
GTCATGCAGC CCGCCATCCG CCAGTACTAC CGGCTGGAGG AGATCTGGGG CGAGAAGCCT
GTGCGCCTGA AGCTGGGCGC TGCCAAGCCG CGCAAGATCA TGGCCTCGGA AGGCGACGAC
GAGGCACCCG CGCGCAAGCC GGCCGCCAAG AAGGCCGCAG CCAAGCCCGC CACGAAGTCC
GCAGCTGGCC AGAAGCCGGC CAAGGCGGCA GCTCCCGCAG CGGCCAAACC GACAGCGAAA
TCCGCAGTGA AGCCAGCATC CAAGCCCGCT GCCAAGCCCG CGAGCAAGGC ACAGAAGGCA
CCGGTCAAGG CCGCATCCAA ACCCGCAGCG AAGAAGACCA CGGCAAAGCC CGTGGCGGCG
AAGAAGCCAG CTGTCAAGAA CGCGGTGAAG ACCGTCGTGG TGAACAAGCC TGTGGCCAAG
AAGGCACCCG CCAAGGCCGC CGCTACCACC ACGGCACGCA AGCCGGTCGC CAAATCCACC
GGTAAGGCTG TTGCGAAGAA GGCCCCCGCA CGCAAGAAGG CCTGA
 
Protein sequence
MTTSSKSETA AKKDVTKLQR AIVDGLEDVK AQDIQVFNTE HLSPLFERVV VATGSSNRQT 
KALAASVRDA VRKAGFPKPR SEGEDNGEWI IVDCGQAVVH VMQPAIRQYY RLEEIWGEKP
VRLKLGAAKP RKIMASEGDD EAPARKPAAK KAAAKPATKS AAGQKPAKAA APAAAKPTAK
SAVKPASKPA AKPASKAQKA PVKAASKPAA KKTTAKPVAA KKPAVKNAVK TVVVNKPVAK
KAPAKAAATT TARKPVAKST GKAVAKKAPA RKKA