Gene Ajs_1899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1899 
Symbol 
ID4671695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1989123 
End bp1990409 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content67% 
IMG OID639838980 
Productphosphoribosylamine--glycine ligase 
Protein accessionYP_986155 
Protein GI121594259 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0151] Phosphoribosylamine-glycine ligase 
TIGRFAM ID[TIGR00877] phosphoribosylamine--glycine ligase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.543102 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.253787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCC TAGTCATTGG CGGCGGCGGC CGGGAACACG CACTGGCCTG GAAGCTGAGC 
CAGTCCCCCA AGACCTCCAA GGTGTACGTG GCGCCCGGCA ACGGCGGCAC GGCGCTGTCG
CCAAAGTATG AGAACGTGCC CATCAGCGAC GTGACGGCCC TGCGCGAGTG GGCGCAGGCG
CAGAAGATCG CGCTCACCGT GGTCGGCCCC GAGGCACCGC TGGCCGCTGG CGTGGTGGAC
GAGTTCCGTA CCCACGGCCT GCGCATCTTC GGCCCCACGC AGGCTGCCGC GCAACTGGAA
AGCTCCAAGG CCTTCTCCAA GGCTTTCATG AAGCGCCACG GCATCCCCAC GGCCGAGTAC
GAGACCTTCA CCGACCCGCA GGCCGCGCAT GCCTACGTGG ACCGTCTGGG CGCACCCATC
GTCATCAAGG CCGACGGCCT GGCGGCGGGC AAGGGCGTAG TGGTAGCCAT GACGCTGCAG
GAGGCCCACG ACGCCGTGGA CTTCATGCTG GTGGACAACA AGTACGGCGT CGCCCACAAC
GAAGGCGGCG CCCGCGTGGT GATCGAGCAG TTCCTCGAAG GTGAGGAAGC CTCGTTCATC
GTGCTGTGCG ACGGCAAGAA CGTCCTGGCG CTGGCCACCA GCCAGGACCA CAAGCGCCTG
AAGGATGGCG ACCAAGGCCC CAACACCGGT GGCATGGGCG CGTATTCGCC TGCGCCGGTG
GTCACGGCCG ACGTGCATGC GCGCGCCATG CGCGAGGTGA TCCTGCCCAC CATCCGTGGC
ATGGAAAAAG ACGGCATCCC CTACACGGGC TTTCTGTATG CCGGCCTGAT GATCGACGCG
ACGGGCCATC CCAAAACGCT GGAGTTCAAC TGCCGCATGG GTGACCCCGA GACACAGCCC
ATCCTCATGC GCCTCAAAAG CGACCTGGTG GAGGTGCTGG GGGCGGCCGT GGACGGCAAG
CTCGACCAGG TGGAACTGCA GTGGGATCGC CGCACGGCGC TGGGCGTGGT GATGGCTGCC
CAGGGCTATC CCGAGAACCC GCGCAAGGGC GATGCCATCA CCGGCCTGCC GCAGGACGCG
GACGACGCCA TGGTCTTCCA CGCCGGCACA CAGCTCGTGG ATGGCGTGGT GCGTACCAGT
GGCGGGCGCG TGCTGTGCGT GACGGCGCTG GCCGACAGCG TCAAGCAGGC ACAGCAGCGT
GTGTATGACG TGGCGCGCGG CATTCACTTC GACGGCGCGC AGTACCGCCA CGACATTGGC
CACCGCGCGG TGAAGGCCAA CGGATGA
 
Protein sequence
MKILVIGGGG REHALAWKLS QSPKTSKVYV APGNGGTALS PKYENVPISD VTALREWAQA 
QKIALTVVGP EAPLAAGVVD EFRTHGLRIF GPTQAAAQLE SSKAFSKAFM KRHGIPTAEY
ETFTDPQAAH AYVDRLGAPI VIKADGLAAG KGVVVAMTLQ EAHDAVDFML VDNKYGVAHN
EGGARVVIEQ FLEGEEASFI VLCDGKNVLA LATSQDHKRL KDGDQGPNTG GMGAYSPAPV
VTADVHARAM REVILPTIRG MEKDGIPYTG FLYAGLMIDA TGHPKTLEFN CRMGDPETQP
ILMRLKSDLV EVLGAAVDGK LDQVELQWDR RTALGVVMAA QGYPENPRKG DAITGLPQDA
DDAMVFHAGT QLVDGVVRTS GGRVLCVTAL ADSVKQAQQR VYDVARGIHF DGAQYRHDIG
HRAVKANG