Gene Ajs_1897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1897 
Symbol 
ID4671649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1986789 
End bp1988300 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content66% 
IMG OID639838978 
Productprotein of unknown function DUF853, NPT hydrolase putative 
Protein accessionYP_986153 
Protein GI121594257 
COG category[R] General function prediction only 
COG ID[COG0433] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0908491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.103131 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAC CCCTCCTGAT TGCACAGCAC GATTCCACGC AATGCCACCT GCTGCCGGGC 
CTGGCCAACC GCCACGGCCT GATCACCGGC GCCACCGGCA CCGGCAAGAC CGTGACGCTG
CAGACGCTGG CCGAGCAGTT CTCGCGCATC GGCGTGCCGG TGTTCCTGTC GGACGTGAAG
GGCGACCTCA CCGGCATCAG CCAGAAGGGC AGTATCGGCG ACAAACTGGC CAAAACGCTG
GCCGACCGCG GCTTGGCCGC GCCCGAGCCC ACCGCCTGCC CCACCACGCT GTGGGACGTG
TTTGGCCAGC AGGGCCACCC GGTGCGCGCC ACCATATCCG ACATGGGGCC GCTGCTGCTG
GGGCGCATGC TGAACCTGAA CGATACGCAA ATGGGCGTGC TCAATCTGGT GTTCAAGATT
GCCGACGACA ACGGCATGCT GCTGCTGGAC CTGAAAGACC TGCGCGCCAT GCTCCAGTAC
GTGGGCGACA ACGCCAAAGA ATTCACCACC GGCTACGGCA ACGTCAGCGC CGCCAGCGTG
GGCGCCATCC AGCGCGGGCT GCTGCAAATC GAGCAGCAAG GCGGCGACCA GTTCTTTGGC
GAGCCCATGC TCAACATCCA GGACTTCATG CAGACCGATG CCGCAGGCCA CGGCGTGGTC
AACATCCTGG CCGCCGACAA GCTCATGAAC TCGCCGCGCC TGTACGCCAC CTTTTTGCTG
TGGATGCTGT CCGAGCTGTT CGAGCAGCTG CCCGAAATTG GCGACCCCGA GGTCCCTAAG
CTGGTGTTCT TTTTTGATGA GGCCCACCTG CTGTTCAACG AAGCGCCCAA GGTGCTGATC
GAGCGCATCG AACTGGTGGT GCGGCTGGTG CGTTCCAAGG GCGTGGGCGT GTATTTCGTC
ACGCAAAACC CGCTGGACAT CCCCGACAGC GTGCTGGCCC AGCTGGGCAA CCGCGTGCAG
CACGCGCTGC GGGCGTTTAC CCCGCGCGAC CAGAAAGCCG TCAAGGCCAC GGCCACCACC
ATGCGGCAAA AGCCGGGCCT CGACATCGAA ACCGCCATCA CCGAGCTGGC CGTGGGCGAG
GCGCTGGTGA GCTTTCTGGA CGCCAAGGGA CGCCCCGGCG TGACCGAGCG CGTGTATGTG
CTGCCCCCTG GCAGCCAGAT TGGCCCCATC GACGCCGCCC AACGCCAGGC GCTGCGCGCC
AGTTCGCTGG TGGCCGGTGT GTATGAGCAG GTGGTGGACC GCGAATCGGC CTACGAAATC
CTGAAAAACC GCTCTGCCAA CGCCCCCGAG GGCAACGGCA AAAACGGCAC CGCGCCCGGC
CAAGCGGCCG ACGAGGGCCT GATGGGCGGG CTCAAAGACA TGCTGTTTGG CAGCACCGGC
CCCCGTGGCG GCCAGCGCGA TGGCCTGGCC CAGACCATGG CCAAATCGGC CGTGCGCACC
ATGGGCACCA CGCTGGGACG CGAGATTTTG CGCGGCGTAT TGGGCAGCCT GCTGGGCGGG
CGCCGGCGCT GA
 
Protein sequence
MSEPLLIAQH DSTQCHLLPG LANRHGLITG ATGTGKTVTL QTLAEQFSRI GVPVFLSDVK 
GDLTGISQKG SIGDKLAKTL ADRGLAAPEP TACPTTLWDV FGQQGHPVRA TISDMGPLLL
GRMLNLNDTQ MGVLNLVFKI ADDNGMLLLD LKDLRAMLQY VGDNAKEFTT GYGNVSAASV
GAIQRGLLQI EQQGGDQFFG EPMLNIQDFM QTDAAGHGVV NILAADKLMN SPRLYATFLL
WMLSELFEQL PEIGDPEVPK LVFFFDEAHL LFNEAPKVLI ERIELVVRLV RSKGVGVYFV
TQNPLDIPDS VLAQLGNRVQ HALRAFTPRD QKAVKATATT MRQKPGLDIE TAITELAVGE
ALVSFLDAKG RPGVTERVYV LPPGSQIGPI DAAQRQALRA SSLVAGVYEQ VVDRESAYEI
LKNRSANAPE GNGKNGTAPG QAADEGLMGG LKDMLFGSTG PRGGQRDGLA QTMAKSAVRT
MGTTLGREIL RGVLGSLLGG RRR