| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1892 |
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| Symbol | |
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| ID | 4671229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1979182 |
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| End bp | 1981656 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639838973 |
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| Product | putative GAF sensor protein |
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| Protein accession | YP_986148 |
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| Protein GI | 121594252 |
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| COG category | [R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0628] Predicted permease
[COG2203] FOG: GAF domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.397553 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAACA GCGGGCCGCA GGAGCCGACC GATTCCAGGC CGGCCAGGGA TGCGGGGGCG
GCGCGCGGCG CCACCGCTTC GGGCTATCCG CCGCAGCGCA CCGTGCACAC CGCCACGGCC
ATGGACGCCA CGGTGCCCAG CCTGCGGTTC ATGATCGGCC TGGTGATCGC GGCGCTGGTG
GTCGCGGGCC TGTATTTCGG CCGTACGCTG CTGGTGCCGC TGGCATTGGC GTTCCTGCTG
AGCTTCGTGC TGGAGCCGCT GGTGGCGCAG CTCAAGCGCA TGGGCCTGCC GCGCCTGCCC
TCGGTCATCG CGGTGGTGAT GGCCATGCTG ATGGTGCTGG GCGTGGGGGC GCTGTTCGTG
GGTAACGAGG CGCGCGAGCT GAGCGCGCAG CTGCCCTCCT ACCAGAACAC CATCCGCAAG
AAGCTGCGCA GCCTGCGCCA GCAGTTGCGC GCGCCCGGCA TGTTCGACGG CGCCAAGCGC
ACCTTCGACA TCGTGCAGCG CGAGGTGGAG GCGGCCGCTC CCGCCTTGTC GGGTGTCGCG
CGCGCGCCGA CCGTGCAAAA GGTGCAGGTG CAGCCGCCCG TGCTGTCGCC CGCCAACCAG
CTCATGGCCG CGCTCTCGGC GGTCAGTGGG CCGCTCACCC AGGCGGGCCT GGTGCTGGTG
TTCGTGATCT TCATCCTGCT GGACCGTGTA GACCTGCGCG ACCGCCTGCT GCGCCTGTGG
GGGGGCAATC TGCACCGCGC CACCGATGCC ATGGACGAGG CGGGCGACCG CATCACGCGC
TACCTGACCA TGCAACTGCT GGTCAACGTG ACCTACGGCA TTCCCATGGC GGCGGGCTTG
TGGCTCATCG GCGTGCCCGG TGCCGTGCTG TGGGGGTCGC TGGCCGCGGT GATGCGCTTC
GTGCCCTACC TGGGGCCGTT CATTGCCGCG GCGTTTCCGC TCACCCTCGC TTTCGCGGTG
GACCCGGGCT GGGACCTGGT GCTGTGGACG CTGGGCCTCA TCGTGCTGCT GGAACTGGTG
AGCAACAACG TCATCGAGCC CTGGCTGTAT GGCTCCAGCA CTGGGCTGTC GGCGCTGTCG
CTCATCGTGG CGGCCACCTT CTGGGCGGCG CTGTGGGGGC CGGTGGGGCT CATCATGTCC
ACGCCGCTCA CCGTGTGCCT GCTGGTGATC GGCCGGTATC TGCCGCAGTT GGCCTTCCTG
GAGGTGCTGC TGGGCAGCCG GCCGGTGCTG GATGAGCCCA CGCGCATCTA CCAGCGACTG
CTGGCAGGCG ACGCTGCGGA GGCCATCGAG TTGAGCACTA CCCGCATCGA GGCCCTGAAG
GGCGCCGTGC CCGCTTTCTA CGGCCAGGTG GGCGTGCCCG TGCTGCGCAT GGCCGTGGGC
GACCATGCGC AGGTGGCCAC GCCCGAGCAC CGCCTGCGCC TGGTCGAAGG CATGGACGCG
CTGCTGGACG AGCTGGAGGA GCAGTACCCG GTGCCCGACG CCGCTGCGCA AGAGCCGGTG
GTGTGCCTGG GCGGCAAGTG GGAGGTCGAC CTGTTCGCGG CGCGCATGCT GGCGCATGCG
CTGTCGCTGC AGCATTGCCC GGCGCTGGCG CGCGTGGAGG GCGCCATGAG CGCCGAACAT
CTGGATGGCC TGGACCTGGA CGCCGTGCGC GTGGTCTGCG TGGTGTGGCT CGCGCCCGAG
CCCACCGCCG CCGCGCGGCA CCTGTGCCGC AGGCTCAAGC GCCGCTGGCC GCATGTGCAC
ATCGTGCTGG CGCTGTGGGG TGGGGTGCAG TCCCAGCCGC AGGACGAGCT GAGTGCCCAA
CTGGGCGCCG ACGCGCTGGC GCTGTCGCTG GAGGAAACCC TGGCCCAGGT GGCGCAGCTG
CAGGGAGTCA GCGTGGATGG CGCCTATACC CCCGCGCCCA TTCCCGCGGA CGACGAGGCG
CGTCTGCGCG CCCTGCAGGC CAGCGGCGTG CTGGACAGCC CCGCGCTGCA GCAGCTGTGC
CAGCACACGG CCCAGCGCGC GGCCGACATC TTCGACGTAC CGTTGGCGAT GGTGTCGCTG
GTGGATCGCG AGCGGCAGGT CACGCTGTGT GCGCACGGCC CGTTGTCGGC CGGCGGGGGG
CAGGCCTGCT CGGCGGGCCA GGGCCTGCCG CGCGGCCTGT CGCTGTGCGG GCATGTGGTG
GCGCGGCAGC GGTCGCTGGT GGTGCTCGAC ATTGCGCGGG ATGCGCGCTT TGCCGGCAAT
CCGGCGCTGC GCGAGCAGGG TCTGCGCTTT TACGCGGGCG TTCCGCTGCG CGACGCGGCG
GGCCATGCGC TGGGCACGCT GTGCCTGATG GACACCGCGC CGCGCACGTT CGATGAGCGG
GAAAAGCGGT TGCTGCAGGC CATGGCCAAC GACCTCATGG CTGGCTGGCG CGACGCCCAG
GCCGCGGGCG GACCGGCGCT ACCCGCGGGT CAGGCCGCGC CATCGGCCAC GGTGGGTCAG
GTGGTGCCGC AGTAG
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| Protein sequence | MGNSGPQEPT DSRPARDAGA ARGATASGYP PQRTVHTATA MDATVPSLRF MIGLVIAALV
VAGLYFGRTL LVPLALAFLL SFVLEPLVAQ LKRMGLPRLP SVIAVVMAML MVLGVGALFV
GNEARELSAQ LPSYQNTIRK KLRSLRQQLR APGMFDGAKR TFDIVQREVE AAAPALSGVA
RAPTVQKVQV QPPVLSPANQ LMAALSAVSG PLTQAGLVLV FVIFILLDRV DLRDRLLRLW
GGNLHRATDA MDEAGDRITR YLTMQLLVNV TYGIPMAAGL WLIGVPGAVL WGSLAAVMRF
VPYLGPFIAA AFPLTLAFAV DPGWDLVLWT LGLIVLLELV SNNVIEPWLY GSSTGLSALS
LIVAATFWAA LWGPVGLIMS TPLTVCLLVI GRYLPQLAFL EVLLGSRPVL DEPTRIYQRL
LAGDAAEAIE LSTTRIEALK GAVPAFYGQV GVPVLRMAVG DHAQVATPEH RLRLVEGMDA
LLDELEEQYP VPDAAAQEPV VCLGGKWEVD LFAARMLAHA LSLQHCPALA RVEGAMSAEH
LDGLDLDAVR VVCVVWLAPE PTAAARHLCR RLKRRWPHVH IVLALWGGVQ SQPQDELSAQ
LGADALALSL EETLAQVAQL QGVSVDGAYT PAPIPADDEA RLRALQASGV LDSPALQQLC
QHTAQRAADI FDVPLAMVSL VDRERQVTLC AHGPLSAGGG QACSAGQGLP RGLSLCGHVV
ARQRSLVVLD IARDARFAGN PALREQGLRF YAGVPLRDAA GHALGTLCLM DTAPRTFDER
EKRLLQAMAN DLMAGWRDAQ AAGGPALPAG QAAPSATVGQ VVPQ
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