| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1890 |
|---|
| Symbol | |
|---|
| ID | 4671303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 1975352 |
|---|
| End bp | 1976875 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639838971 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_986146 |
|---|
| Protein GI | 121594250 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.943834 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.754325 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATGG CCGAAATCGC CAGCCTTGGC ATCGCCAACC CCTACAAGCA GCAGTACGGC
AACTACATCG GCGGGCAGTG GGTGGCGCCC GTGGACGGGC AGTACTTCGA GAACATCTCG
CCCATCAACG GCCAGAAGTT CACGGCCGTG CCGCGCTCCA ACAGCAAGGA CATCGACGCC
GCACTGGACG CCGCGCACAA AGCCAAGGCC GCGTGGGGCC GCACCTCGAC CACCGAGCGC
GCCAACATCC TGAACCGCAT CGCCGACCGC ATGGAAGCCA ACCTGCTGCA GATCGCCGTG
GCCGAGACCA TCGACAACGG CAAGCCGCTG CGCGAGACCA TGGCAGCCGA CATTCCGCTG
GCCATCGACC ACTTCCGCTA CTTCGCCGGC GCCGTGCGCG CGCAGGAAGG CGGCATCAGC
GAGATCGACG CCGACACCAT CGCCTACCAC TTCCATGAGC CACTGGGCGT GGTCGGGCAG
ATCATTCCGT GGAACTTCCC CATCCTGATG GCGGTGTGGA AGCTCGCCCC CGCGCTGGCT
GCGGGCAACT GCGTGGTGCT GAAACCCGCG GAGCAGACGC CCGCCTCCAT CCTGGTGCTG
ATGGAGATCA TTGGCGACCT GCTGCCGCCG GGCGTGGTCA ATGTGGTCAA CGGCTTTGGC
CTGGAGGCCG GCAAGCCGCT GGCCTCCAGC AACCGCATCG CAAAAATAGC CTTCACGGGC
GAGACCACCA CGGGCCGGCT GATCATGCAG TACGCCAGCC AGAACATCAT TCCCGTGACG
CTGGAGCTGG GCGGCAAGAG CCCCAACATC TTCTTCGAGG ACGTGATGTC CGCCGACGAC
GGCTTCTTCG ACAAGGCGCT GGAAGGCTTT GCGATGTTCG CGCTGAACCA GGGCGAGGTC
TGCACCTGCC CCAGCCGCGC GTTGATCCAG GAATCGATCT ACGAGCGCTT CATGGAGCGC
GCGCTCAAGC GCGTGGCCGC CATCCAGCAG GGCCACCCGC TGGACAAGAA CACCATGATC
GGCGCCCAGG CCTCGCAGGA GCAACTGGAA AAGATCCTTT CTTACCTGGA CCTGGGCAAG
CAGGAAGGCG CCCAGTGCCT CATCGGCGGC GCGCGCAACA CCGCCCTGGG CGGCGACCTG
GCCGGCGGCT ACTACGTGCA GCCCACGGTG TTCAAGGGCC ACAACAAGAT GCGCATCTTC
CAGGAGGAAA TCTTCGGCCC CGTGGTCTCG GTGACCACCT TCAAGACCGA AGAAGAGGCG
CTGGAGATCG CCAACGACAC GCTCTACGGC CTGGGCGCGG GCGTGTGGAG CCGTGATGGC
GCGCGCGCCT TCCGCATGGG CAAGGGCATC CAGGCCGGGC GCGTGTGGAC CAACTGCTAC
CACCACTACC CCGCGCACGC CGCGTTTGGC GGCTACAAGC AGTCGGGCAT CGGCCGTGAG
AACCACAAGA TGATGCTGGA CCACTACCAG CAGACCAAGA ACCTGCTGGT GAGCTACACC
CAGCAGCCGC TGGGCTTCTT CTAA
|
|---|
| Protein sequence | MNMAEIASLG IANPYKQQYG NYIGGQWVAP VDGQYFENIS PINGQKFTAV PRSNSKDIDA
ALDAAHKAKA AWGRTSTTER ANILNRIADR MEANLLQIAV AETIDNGKPL RETMAADIPL
AIDHFRYFAG AVRAQEGGIS EIDADTIAYH FHEPLGVVGQ IIPWNFPILM AVWKLAPALA
AGNCVVLKPA EQTPASILVL MEIIGDLLPP GVVNVVNGFG LEAGKPLASS NRIAKIAFTG
ETTTGRLIMQ YASQNIIPVT LELGGKSPNI FFEDVMSADD GFFDKALEGF AMFALNQGEV
CTCPSRALIQ ESIYERFMER ALKRVAAIQQ GHPLDKNTMI GAQASQEQLE KILSYLDLGK
QEGAQCLIGG ARNTALGGDL AGGYYVQPTV FKGHNKMRIF QEEIFGPVVS VTTFKTEEEA
LEIANDTLYG LGAGVWSRDG ARAFRMGKGI QAGRVWTNCY HHYPAHAAFG GYKQSGIGRE
NHKMMLDHYQ QTKNLLVSYT QQPLGFF
|
|---|
| |