Gene Ajs_1887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1887 
Symbol 
ID4671543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1972732 
End bp1973739 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content63% 
IMG OID639838968 
Producthypothetical protein 
Protein accessionYP_986143 
Protein GI121594247 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.949228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAAG AACTTGAGGT CCAGGCCGAG GTTGAAGCCC TGCGGGAGCG ATTCAGCGAC 
ACCAAAACGC TGTACCGCGA GGTCTGCGCG CTGCTGTTTT TCCGGCACGG CATCACGCCC
ACGGCAAGCA AGCTCTATCA GCATGTGCGC AAGGGCTCCA TGAGCGCCCC GGCAGAGGCA
CTGGCCAAGT TCTGGGAGGA GCTGCGCGAC AAGGCGCGGG TGGAGATCGA CCATCCGGAT
CTGCCTGACG CACTGAAACA GGCGGCAGGC CAGGCGGTCA GCGTCTTGTG GGCGCAGGCG
ACGGAATTGG CGCGCGAGGA GTTGGCGGTG CTGCGTGTAG AGGCCCGCAC GGAAGCCCAG
AGCGCCCAGA CAGATCTGCA GGAGGTTCAG CAGCGAAACA CCGCCCTGGA GGCCCAAATC
CAGGCCGCCC AGAGCAAGGG CGCGGAACTG GAGAGCCGAC TTCAGCGCCT AGCTGCTGAG
CTGGAACAAG AGCGGCGTGC GCACGCTGCG AGCACTGCAC GGGGTGAGGC CCTGTCACTG
CAGGTGGATG AGCTGAAGCT GGAGCAGTCC AAGAGCCGCC AGCATTTCAG CGCGGAACTG
GAAAAAGGAC GTGCGGCCAT CGATGAAGCA GCCCAACGGG CCACCGAGGC CGAACACCGG
GCTCTTCGCG AGATTGACCG AGAGCGCACC GCGCGTGGGC AGGCGGACAA GCAGTTGGAG
CAATTACGGG GCAAGCTCAC TGAGACTGAG CGGGCTCATC ACGCCAAGTT ACTGGAAGCC
AATGCCGCCC AGACCCGGTT GGCGGCAGAA ATGGACAGCG CAAAGGCATC AATGGGAGAA
AGCGCTAGGG TGAACCAGGC GCAAGGCATA GAGTTGCAGC AAGCCCTTCA GGCCGTGGCG
CAGTACAAGA CTGAAGCCGA CACTCTGCGC ACACTGGTCG CGCAGTTCAA GCCAGCACAG
AAGTCCACGC GCAAAAAGCG TGAAATCGAG AGCCCAGACG GCCGGTAA
 
Protein sequence
MNQELEVQAE VEALRERFSD TKTLYREVCA LLFFRHGITP TASKLYQHVR KGSMSAPAEA 
LAKFWEELRD KARVEIDHPD LPDALKQAAG QAVSVLWAQA TELAREELAV LRVEARTEAQ
SAQTDLQEVQ QRNTALEAQI QAAQSKGAEL ESRLQRLAAE LEQERRAHAA STARGEALSL
QVDELKLEQS KSRQHFSAEL EKGRAAIDEA AQRATEAEHR ALREIDRERT ARGQADKQLE
QLRGKLTETE RAHHAKLLEA NAAQTRLAAE MDSAKASMGE SARVNQAQGI ELQQALQAVA
QYKTEADTLR TLVAQFKPAQ KSTRKKREIE SPDGR