Gene Ajs_1884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1884 
Symbol 
ID4671256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1970273 
End bp1970656 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content61% 
IMG OID639838966 
Producthypothetical protein 
Protein accessionYP_986141 
Protein GI121594245 
COG category[S] Function unknown 
COG ID[COG4679] Phage-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.440545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.626168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCC AGCCGCGCAA ACCGCTCAAA TGGGTCGGCT CGGCCAAGCG GGATCTGGAC 
GGAATGCCCG AGGACGTCCA AGACGTGTTC GGCCATGCGA TCGACCTGGC GCAAGCCGGT
GGCAAGCACC CGGACGCCAA GGCGCTGAGC GGGTTTGGTT CCGCCGCGGT TTTGGAAGTG
GTCGAGGATT TCCGGAGCGA CACGTTCCGG GCGGTCTACA CGGTCAAGTT CGCGGGCTGG
GTCTATGTGC TGCACTGTTT TCAGAAGAAG TCCAAGAGCG GCATCAAGAC GCCGAAGGAG
GACCTGGACC TGATCAAGGC ACGGCTGAAG GCTGCGGTGC AGGATTTTGA GGCTTGGCAA
GCAAAGCAAG GAGTAAAGCG ATGA
 
Protein sequence
MSTQPRKPLK WVGSAKRDLD GMPEDVQDVF GHAIDLAQAG GKHPDAKALS GFGSAAVLEV 
VEDFRSDTFR AVYTVKFAGW VYVLHCFQKK SKSGIKTPKE DLDLIKARLK AAVQDFEAWQ
AKQGVKR