Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1883 |
Symbol | |
ID | 4671176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 1969947 |
End bp | 1970276 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639838965 |
Product | XRE family transcriptional regulator |
Protein accession | YP_986140 |
Protein GI | 121594244 |
COG category | [S] Function unknown |
COG ID | [COG5606] Uncharacterized conserved small protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.393297 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.613719 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGA ACAGCCACAT CACCATCGAA GAAGGCAGCA CCAACGTCTA CGCGGACCTG GGCTATGCCG ACGCTGCGGA AATGCAGCGC AAGTCGCAGC TCGCGGCTGA GATTGCCCGC GCCATCAAGG CGCGACGCCT GACGCAACAG GGAGCCGCCG CGCTGCTGGA AATCGATCAG TCCAAGATCT CCCGCATCAC GCGCGGCCAG TTTCGCGGGG TCAGCGAGGC GAAGCTGCTG GAACTGGTGG CCAAGCTGGG GCATGACGTG AAGATCGTGG TCGGTCCAGT ACGGCGGCGT GCCGGTAAGA TCGAGCTGCA GTTCGCCTGA
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Protein sequence | MSQNSHITIE EGSTNVYADL GYADAAEMQR KSQLAAEIAR AIKARRLTQQ GAAALLEIDQ SKISRITRGQ FRGVSEAKLL ELVAKLGHDV KIVVGPVRRR AGKIELQFA
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