Gene Ajs_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1883 
Symbol 
ID4671176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1969947 
End bp1970276 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content64% 
IMG OID639838965 
ProductXRE family transcriptional regulator 
Protein accessionYP_986140 
Protein GI121594244 
COG category[S] Function unknown 
COG ID[COG5606] Uncharacterized conserved small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.393297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.613719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGA ACAGCCACAT CACCATCGAA GAAGGCAGCA CCAACGTCTA CGCGGACCTG 
GGCTATGCCG ACGCTGCGGA AATGCAGCGC AAGTCGCAGC TCGCGGCTGA GATTGCCCGC
GCCATCAAGG CGCGACGCCT GACGCAACAG GGAGCCGCCG CGCTGCTGGA AATCGATCAG
TCCAAGATCT CCCGCATCAC GCGCGGCCAG TTTCGCGGGG TCAGCGAGGC GAAGCTGCTG
GAACTGGTGG CCAAGCTGGG GCATGACGTG AAGATCGTGG TCGGTCCAGT ACGGCGGCGT
GCCGGTAAGA TCGAGCTGCA GTTCGCCTGA
 
Protein sequence
MSQNSHITIE EGSTNVYADL GYADAAEMQR KSQLAAEIAR AIKARRLTQQ GAAALLEIDQ 
SKISRITRGQ FRGVSEAKLL ELVAKLGHDV KIVVGPVRRR AGKIELQFA