| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1878 |
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| Symbol | |
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| ID | 4671159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1962744 |
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| End bp | 1965386 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639838961 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_986136 |
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| Protein GI | 121594240 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAAG CCGAAAAAAT CCGCCTCGAC ATTCCCGTCC TTCTATCCGG CGTGGAAGAT
GTCAAGGACC TGTGCGTGGC GCGGCTCATC TCGCTGCTTT CAGGTCGCAA CGGCATCAGT
GAGGTGCATG TTGCCAACGC CGGGGGTTCG CAGCCGCCTC AGTTGTGCAT TCACTACCGG
CCCGACACGA TCTCGCTGCA GCGTGTGCGC GAACTCGCTG CCTCATCGGG CGCCGAGCTG
GGCGAACGCT TCGCGCATCT GGCGTTCCAC ACATCGACCC AGCACGCGCG CGCCGCGAGG
CGCCTGAGCG ACAAGATCTC CGCACTCCAG GGCGTGGTCG AGGCGGAAGT TTCAACCACG
GGTTCCGTTC GCATCGAATT CGACCGGTCG CTGGTCGATG AAGCGAAGGT CAGGTCCGAA
CTCGAAATGC TTGGGCTTCC CCTGAAGCCA GCGAGCTCGG CCCCGGCGAA ACACGGTGAA
GGCGTGCATT CGCACGACGG CCATGCGCAT GAGGGCGGCC ATGCGTACGA TGACGCGCCA
ACGCCGCACC AGGGTCATGC GCATGCCGAG CACGGTCACG ATGACCATGC CGACGGGAAG
GACCATGACC ACGACCATGC GGATCACGCC GGCGCGGGCC ATGCCCATGA CCATGGCGGG
CCCTTCGGAG AAAAGTCCGA ATTGATCTTT GCGTTGCTGG CGGGCCTCAT GGTGCTCATC
GGCTGGCTGC TTGCGTGGCG CGACCTCGCG CCCGAACTCG TCAGCAAGGG CTTTTACGTC
GCCGCGTATG TCTTCGGCGG CTACTACACG CTTAAAGAGG CGATCGAGAA CATCCGCGCG
AAGCGCTTCG AGATCGACAC GCTGATGCTC GTTGCCGCCG CGGGCGCAGC CGCACTCGGT
CAATGGGCCG AAGGAGGCCT GCTCCTGTTC CTGTTCAGTC TTGGCCACTC GCTGGAACAT
TACGCCATGG GGCGGGCACG CAAGGCGATT GAAGCGTTGG CCAAGCTCGC GCCCGAAACT
GCGCTGGTGA AACGGCCCGA CGGCAGCACG GAACAGGTCG CGGTGGCGCA ACTCGTAGTG
GGCGACGTGG TGCTCGTCAA GCCGAACGAG CGGCTGCCCG CCGACGGCTT CGTGGTGCGT
GGCGAGTCCA GCGTGAACCA GGCCCCCGTC ACCGGTGAAA GCGTGCCCGT GGACAAGCGG
CCGGTCGACG ATTCCCAGGC GGCGTTGCGG GCGTTCGAGA AGGTTGCCGC ACTGCACAAG
GTGTTCGCAG GCACGATCAA TGGACCGGGC GCCATCGAAG TCATGGTGGC CCGTGCCTCG
ACGGAGTCCA CGATGGCACG CGTTGTCAAG CTGGTCACCG AAGCTCAGAC GCAGCGCTCA
CCCACGCAGA ATTTCACCGA CAAGTTCGAA CGGATTTTCG TTCCCGTCAT CCTCATTGGC
GTGGTTCTTC TGCTGTTCGC CGGCTTCGTC ATCGACGAGC CGTTCAGCAC CACTTTCTAC
CGGGCCATGG CCGTGCTCGT GGCGGCAAGC CCCTGCGCGC TGGCGATTTC GGTGCCTAGT
GCCGTGCTGA GCGGCGTGGC TCGCGCCGGG CGCAGCGGCG TGCTGGTCAA AGGCGGCGGC
CCTTTGGAGA ACCTGGGCAC CCTGACGGCG ATTGCGTTCG ACAAGACGGG GACACTCACG
GAAGGCAAGC CCCGGCTGAC GGACGTCGTT GCCGGCCCCG GTTCGAGCGA ATCGGAGTTG
CTGACGGTCG CGCTGGCGGT GGAGCGGCAC AGCGACCATC CGCTGGCCTC CGCGATAGTC
GAAGGCGCAC AAAAGCGACT GACCTCGGGC AGCCCCGAAC CCGGCGTCGA ATCGGTGCAG
AGCATCACTG GCCGGGGCGT ATCGGCACGA GTTGCCGGGG AAATGTTGCA TGTGGGCAAG
GCCGCCATGT TTTCCGAGAT CGGCGGGGCG CCAATGCCGC CGGAGGTGGC TCGCGCCAAC
GAGGCGCTCA TCGCCCAGGG ACGCACGACC ATGGTCGTGC GCCTGGGAGA GCGCTACCTG
GGTGTGCTCG GCGTGATGGA TACGCCCCGG CCGGCCGCAG CGGGCGTGAT GCGAGCCCTC
AAGGAGCTCG GAATCGAGCG CCTGATCATG ATCTCTGGCG ACAACCAGCG CGTTGCCGAA
GCCGTGGCGC AGAGTGTCGG CCTTACCGAA GCGCAGGGTG ATCTGATGCC GGAACACAAG
GTGGATGCCA TCAAGAAGTT GCTGGAGAAG GGAAGGGTCG CGATGGTGGG CGATGGGGTC
AACGACGCGC CGGCCATGGC GAACGCGACC GTGGGCATTG CGATGGGCGC GGCCGGCTCA
GATGTGGCGC TGGAGACCGC GGACGTGGCG CTGATGGCCG ACGACCTGAG CCAGTTGCCT
TTCGCGGTCG CGCTGTCGCG GCGCACGGCG CGGGTGATCC GCCAGAACTT GTGGGTGAGT
TTGGGGGTTG TGGCCGTGCT GATCCCGGCA ACCATCTTTG GGCTGAACAT TGGCACGGCT
GTTCTGTTCC ACGAAGGATC GACGTTGCTC GTGGTCGTCA ACGCGCTGCG CTTGCTCGCA
TTCGAAGGTG TGCCTTCCGT CGGCGCCGTG GTTCCGCAAG CAGCGCCCAC CGCTGCCTCC
TGA
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| Protein sequence | MAKAEKIRLD IPVLLSGVED VKDLCVARLI SLLSGRNGIS EVHVANAGGS QPPQLCIHYR
PDTISLQRVR ELAASSGAEL GERFAHLAFH TSTQHARAAR RLSDKISALQ GVVEAEVSTT
GSVRIEFDRS LVDEAKVRSE LEMLGLPLKP ASSAPAKHGE GVHSHDGHAH EGGHAYDDAP
TPHQGHAHAE HGHDDHADGK DHDHDHADHA GAGHAHDHGG PFGEKSELIF ALLAGLMVLI
GWLLAWRDLA PELVSKGFYV AAYVFGGYYT LKEAIENIRA KRFEIDTLML VAAAGAAALG
QWAEGGLLLF LFSLGHSLEH YAMGRARKAI EALAKLAPET ALVKRPDGST EQVAVAQLVV
GDVVLVKPNE RLPADGFVVR GESSVNQAPV TGESVPVDKR PVDDSQAALR AFEKVAALHK
VFAGTINGPG AIEVMVARAS TESTMARVVK LVTEAQTQRS PTQNFTDKFE RIFVPVILIG
VVLLLFAGFV IDEPFSTTFY RAMAVLVAAS PCALAISVPS AVLSGVARAG RSGVLVKGGG
PLENLGTLTA IAFDKTGTLT EGKPRLTDVV AGPGSSESEL LTVALAVERH SDHPLASAIV
EGAQKRLTSG SPEPGVESVQ SITGRGVSAR VAGEMLHVGK AAMFSEIGGA PMPPEVARAN
EALIAQGRTT MVVRLGERYL GVLGVMDTPR PAAAGVMRAL KELGIERLIM ISGDNQRVAE
AVAQSVGLTE AQGDLMPEHK VDAIKKLLEK GRVAMVGDGV NDAPAMANAT VGIAMGAAGS
DVALETADVA LMADDLSQLP FAVALSRRTA RVIRQNLWVS LGVVAVLIPA TIFGLNIGTA
VLFHEGSTLL VVVNALRLLA FEGVPSVGAV VPQAAPTAAS
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