Gene Ajs_1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1858 
Symbol 
ID4670767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1943299 
End bp1944963 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content64% 
IMG OID639838943 
Productphosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase 
Protein accessionYP_986118 
Protein GI121594222 
COG category[R] General function prediction only 
COG ID[COG2194] Predicted membrane-associated, metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCAAGT TCCCATCGAC CCCCGGCCCA GCCCTGCGCT TTCGTCTCTC GCAAGGAGCC 
GTGGCGTGGA TCGCGGGACT CTGGCTGATC GCAGCCGACA ATCCCGCCTT TTGGCGCAGT
CTTTGGATGT CGCGCGACGT CGGCGACGTC CGGGTCCTTG CCGCTGTCGG TGCACTGGCG
CTGCTGCTGT GGGCGGCCTT CAGCTTTATC TGCCGCCTGC TGTGCTGGCC TCGCACCGGC
AAGTTTGCCG TCGCGGCACT GCTGCTGATC GGAGCGGCCG CGGCACATTT CATCGGCACA
TACGGCATCT TCATCGACAA GGGCATGGCC CGGAACGTTG TGCAGACGGA CTGGCGGGAA
GCGACGGATC TCCTCTCCTT CCGTTTTGCG TTGGACGTCG CGCTGCGCGG CATCCTGCCC
GCCGCCATCC TGGTCTTTTT GGTGGAAGTG CGTTACGCCC CATGGCGTCG TTCCTTGATG
CAAATCGGCT GGCATGCGCT TCTGCTCGGC GTCGTCGGGG CCGCGTCTGT CTTTGCGTTC
TTTGGCGAAT ATGCGGACAT TGCGAGGAAC CACCGCGAGT TGCGCCATCT GCTGACGCCC
ACCAACGTCG CGAATAGCGC GTATGGACTG TGGAAGGAGA GCCGCGCGCA GCGACAGCCC
GTCACGAGAC TGGCAGAGGA CGCGACCCGG CCCGCAGCGT CCGCGTCCGC CAAGCCTCTC
GTCGTGGTGC TGCTGGTCGG GGAGACGGCG CGGGCAGCAT CGTTCTCGCT CGGAGGCTAT
GGGCGGCCCA CCAATGCGGC ACTGGCGGGC AGAGACGTCG TCTACTTCGA CTCCGTCACG
TCCTGCGGAA CGGACACGGC AACATCATTG CCTTGCATGT TTTCCGACCT GGGCGAAAAG
AATTTTTCAG TCAACAAGGC GAACGCACGG GAAAACGTCC TGCACGTGCT CCAGCGCACA
GGCGTCGGCG TCACTTGGCT GGAAAACAAC TCCGGTTGCA AGGGCGTGTG CGATCGGATC
GAGACCGAAG ACCTTTCCGC GGCGGGCGCG ACCGGGCTGT GCGCTTCCGG CGAGTGCCTG
GACGCCATCT TCGTGGACGC GTTGCGCCGG CGCTTGCCGA AGTCGAACAG CGACAGCCTC
CTGGTTCTGC ACATGAAAGG CAGCCATGGT CCTGCGTACT TCCGACGCGC GCCATCCGCT
CGCCCCTTCG CGCCGATCTG CGCTACGGCG GTTATCCAAT CCTGTACTGA GGAATCGCTG
CGCAACACTT ACGACAATTC GATCGCCTAC ACGAGCGAAG TACTCGCCCA ATCCATCGAC
CTGCTTGCGG CCGACAACAC ACGTGACACG GTATTGCTCT ACGTGTCGGA CCACGGCGAA
TCGCTGGGCG AACGCGGCAT CTATCTTCAT GGGCTCCCCA AGCTGATCGC CCCCGCCGAG
CAGACGCGCA TTCCGCTGCT GCTTTGGATG TCCGCCGGCG CCCGGGAGCG GCTCGGCGTG
GACACGATCA AGCTGCGGGA GCGCGCTTCA CGTGCGGCGT CGCACGACAA CCTGTTCCCG
ACCTTGCTCG GCCTTTTCGA CGTGCGGGCC AGGATCTATG ACCAGAATGC GGACTTACTC
GGAACCGTAA GGGACCGGAG CCCAGAATTG GTCGGCCCGC GCTAA
 
Protein sequence
MSKFPSTPGP ALRFRLSQGA VAWIAGLWLI AADNPAFWRS LWMSRDVGDV RVLAAVGALA 
LLLWAAFSFI CRLLCWPRTG KFAVAALLLI GAAAAHFIGT YGIFIDKGMA RNVVQTDWRE
ATDLLSFRFA LDVALRGILP AAILVFLVEV RYAPWRRSLM QIGWHALLLG VVGAASVFAF
FGEYADIARN HRELRHLLTP TNVANSAYGL WKESRAQRQP VTRLAEDATR PAASASAKPL
VVVLLVGETA RAASFSLGGY GRPTNAALAG RDVVYFDSVT SCGTDTATSL PCMFSDLGEK
NFSVNKANAR ENVLHVLQRT GVGVTWLENN SGCKGVCDRI ETEDLSAAGA TGLCASGECL
DAIFVDALRR RLPKSNSDSL LVLHMKGSHG PAYFRRAPSA RPFAPICATA VIQSCTEESL
RNTYDNSIAY TSEVLAQSID LLAADNTRDT VLLYVSDHGE SLGERGIYLH GLPKLIAPAE
QTRIPLLLWM SAGARERLGV DTIKLRERAS RAASHDNLFP TLLGLFDVRA RIYDQNADLL
GTVRDRSPEL VGPR