| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1855 |
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| Symbol | |
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| ID | 4670579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1939904 |
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| End bp | 1941427 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639838941 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_986116 |
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| Protein GI | 121594220 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAC TACGACACAC ACTGCAACTG CTGCACGGCG GGGTCTTGAG CACCCGTCAA
ATCGGTGCCG CTCTCGGCAT CTCCAAATCC ACTGTCAGCG AGATAGCCAG CTACGCGCGC
GTGGCCGGCG TGGACTGGGC ACTGGCCCAG AGCCTGAACG ACGACGAACT CCAGGCCCGG
CTCTACAAGC CACCCGTGGC GCGCGAGTCC CGGCACCTTG AACCCGACCA CGCCCACATC
CACCGCGAAC TGCGCCGACC TGGCGTGACG CTGCAGTTGC TTTGGGAGGA ATACCAGCAA
CAGCACAGCG GGCAGGCGTA CAAGTACAGC GCCTTCTGCG AGAAGTACAA GGCCTGGGCC
CGGCGCCTGC AGCGCTCCAT GCGCCAGACC CACACGGGCG GTGACAAGCT CTTTGTGGAC
TACGCCGGCC AGACCGTTCC CGTGGTGGAT GCCGACACTG GCGAGATACG CCAGGCCCAG
GTCTTCGTGG CCGTGCTGGG CGCATCGAAC TACACCTACG CCTGCGCCAC CGCCAGCCAG
AAGGCCACCG ACTGGGTGGC CAGCATCATT AGCGCGCTGG AGTTCATCGG CGGCGTGCCC
CGCCTGCTGG TGCCTGACCA GCCGCGCGCC CTCATGGCCC GACCCGACCG TTACGAGCCC
ACCGCGCACC GCCTGCTCGA AGAGCTCTGT GCGCACTACA GCCTGGCCGT GATGCCCGCG
CGCCCGGCCA AGCCACGCGA CAAACCCAAG GTGGAGGTCG CTGTGCAGGT GGTCGAGCGC
TGGATTCTGG CCAGGCTGCG CCACCAGACC TTCTTCAGCC TGGCCGAGCT CAACCGGGCG
ATTGCCGCCT TGCTGGTGGA CTTGAACCAG CGCGCGTTCA AGAAGCTGCC GGGCAACCGC
ACCAGCGCCT TCGCCGAACT CGACCGGCCA GCCCTGCGCC CCCTGCCGCC GGTGCGCATG
CCCATCGCGC GCTTCAAACC CGCCCGCGTC AACATCGATT ACCACGTTGA GCTCGATGGC
CACTACTACT CGGTGCCCCA CGCCCTGGTG GGTGAGCCGG TGGAGTTGCG CATCACGGCC
GGCACGCTCG AAGTCCTGCA CGGCAGCAAA CGCGTGGCCG CCCACGCCCT CAATCCCCGA
CGGGGTGCAC ACACCACCAC GCCCGAGCAC ATGCCGGCCT CGCACCGGGC GCACCTGCAG
TGGACGCCGG CCAAGCTCAT CGCCTGGGGT GAGCGCGTGG GCGCGGCCAC CGCCGCCGTG
GTGCGCTGGC AGATGGAGCA CCGCCAGCAT CCCGAGCAGG GTTACCGCTC CTGTCTGGGC
CTCATGCGCC TGGGCCGTGA GTACGGGGCT GACCGGCTGG AGGCCGCCTG TGCGCGGGCG
CAGTCGATTC GCTCACCGTC CTACAAGAGC ATCGCCTCCA TCCTGGGCTG CGGCCTGGAC
CAGCGGCCGC TGGATGCGCC GATGGCCGCA CAGGCGAGCC TGCCGCTGCA CGAGAACGTG
CGCGGGCCGG GCTACTACCA CTGA
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| Protein sequence | MSKLRHTLQL LHGGVLSTRQ IGAALGISKS TVSEIASYAR VAGVDWALAQ SLNDDELQAR
LYKPPVARES RHLEPDHAHI HRELRRPGVT LQLLWEEYQQ QHSGQAYKYS AFCEKYKAWA
RRLQRSMRQT HTGGDKLFVD YAGQTVPVVD ADTGEIRQAQ VFVAVLGASN YTYACATASQ
KATDWVASII SALEFIGGVP RLLVPDQPRA LMARPDRYEP TAHRLLEELC AHYSLAVMPA
RPAKPRDKPK VEVAVQVVER WILARLRHQT FFSLAELNRA IAALLVDLNQ RAFKKLPGNR
TSAFAELDRP ALRPLPPVRM PIARFKPARV NIDYHVELDG HYYSVPHALV GEPVELRITA
GTLEVLHGSK RVAAHALNPR RGAHTTTPEH MPASHRAHLQ WTPAKLIAWG ERVGAATAAV
VRWQMEHRQH PEQGYRSCLG LMRLGREYGA DRLEAACARA QSIRSPSYKS IASILGCGLD
QRPLDAPMAA QASLPLHENV RGPGYYH
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