| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1842 |
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| Symbol | |
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| ID | 4671472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1922640 |
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| End bp | 1925678 |
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| Gene Length | 3039 bp |
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| Protein Length | 1012 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639838930 |
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| Product | transposase Tn3 family protein |
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| Protein accession | YP_986105 |
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| Protein GI | 121594209 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.550818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAGCA TTGAACGGAC TGCGTACCCT CGATTTCCTC GAATATTGAC GCTCAAAGAC
CTGCAAGCAT CGTTCACTCC GAAGCCCGAG GAGATTGAAT GGGCGCAGCA ACAGTCACGC
ACTCCGCAAC GTCGGCTGGC ATTGTTGGTG CTGCTCAAAT GCTTTGAGTT CCTGCGACAC
TTCCCGGCGC TCGATGCGAT TCCCGCCGAG GTTGTCGAGA ATATCTCAGC AACGCTGGGC
GTCGCTCCGA CTGACAAGAT CGAATTCGCT TCGCTCGCCA CGCTGTATCG ACACCACAAA
GTGATTCGAG AACTGCTTGG TGTGAAGCCC TACACAGATG GGCAAACACG AAGGCTGGCT
ATCCAGATAG CCCAACAGGT CGCCAATGTC GTGGAGACCC GTGTTGACAT CATCAACATC
ACCATCGAAG AGTTGGTGCG GCTGGGTTAC GAGCTGCCAG TGTTCCGCAC GCTAGACGAA
ATCTCCGAAC AAGCCCACTC GGCCGCGGAG GCCGCATTGA ATGCACGAAT CAACCAGCGC
CTGAGTTCGG CCCAAAGAAC GTGGCTTGAC CGATTGCTGG AGTCGGAATT ACCTGCAAGG
CGAACTCTGT ACAACCAGAT CAAGAAATCG GCAAAAAAAG CCTCGCGCAA GCATCTTGAT
TTGCTGTTGG ACCAGTTGAC ATGGCTTGAG TCACTGCCTG ACAGCGATGC GCTGCTCGAC
GGCATTCCGG TTACCAAGCT GAACTACATG GCTGGCATGG CATCGGCGCT CGATGCGGGT
GACATGAAGG ACTTACTGCC CGCCAAGCGC TACACATTGA TCCTGGCATT GATCCGACAG
ATGCGCGTGA GGGCTCGCGA CGATGTGGCA GAAATGTTCA TTCGCCGCAT CGGAGCCATC
CACAGGACCG CAAGAGAGGA ACTGCAGGTG ATCCAGGCGC GCCAGCGCGA ACTGAGCGAA
GAACTCGTCG CCACGCTGGA GCAGGTGCTG GAGATCCTCG CAGAAAACCT GGATGACGCG
AGTACCGGGC AGCGCGTTCG AGATCTGCTT GCCCCGCACG GTAGCCTGGA TCAACTGACG
ATGGACTGTG AGGCCATCCG TGTGTGGAGT GGCGGTAACC ATCTACCGCT GGTCTGGAAG
GCATTCAGCA GTTGGCGAGC GGCGATGTTC CGGATGGCTA AGGCGTTGCG CTTTGAGGCT
GCTACCCAGG ACCGCAGTCT GCTGGATGCC CTTCAGGTCG TGCTGGCCAA CGAGCATCGC
AAGGTGGAGT GGATCGAGGA TGACCTGGCG CTATCGTTCG CCTCCGAACG TTGGCGCAAG
CTGGTGCGTC GTTCGCATGG GCTGGGCCAT CCGACGAACC GCCGCTACCT CGAAGTGTGT
GTGTTCAGCT ACTTGTGTGG TGATCTTCGC TCTGGCGATG TTTGCATTGA AGGCTCAGAG
TCATTTGCCG ACTACCGCTT GCAACTGCTG CCCTGGAAGG AGTGCGAAGC GCAGTTGCCA
ACCTATTGCG ACCGGATTGG AATACCAGCC ACTGCGGGTG ACTTCGTAGA CGGACTCAAG
CAATTGCTCA CCGAGACGGC CAAGAAAATC GATGATGAGT TTCCCCAGCA TGCCGGAGAC
GTGGTGATCG GTTCCAACGG TGAGCCGACG CTGCGGCGTG TTGCCGCGCG CGAAGTTCCG
GCATCTGCCA TCGCACTGCA TGCCGCTATC GAAAATCGCA CGGCCCCTCG CAACCTGCTG
GATGTTCTCG CCAACATCGA GCACTGGACG GGATTCACCC GAAACTTTGG GCCGCAGTCT
GGCGACGATC CTAAACTTCG CAATGCGCGT GAGCGCTACT TGCTGACCGT TTTTGCCATG
GGCTGCAACC TGGGGCCCAA TCAGGCCGCG CGCCATCTGT CCAACGGTGT GACACCGCAT
CAACTGTCCT ATGCCAACCA GCGGCACATG AGCCTGGACC AGTTGGACAA CGCCTGTCGG
GATCTGACCG AGCTGTATCT GCGGCTTGAG CTGCCCAAGC TGTGGGGCGA AGGCAAAAAA
GTCGCGGCAG ATGGCACTCA GCACGACTTC TACGACCAGA ACCTGCTGGT GGGCATGCAT
TTCCGGTACC GGCGCATGGG GGCCGTGGCC TATCGGCATG TCGCCGACAA CTACATCGCG
GTTTTTCGCC ACTTCATACC ACCAGGGGTA CTGGAGGCGG TCTACGTCAT CGAGGGCCTG
ATGAAGGCAG GCTTGAGCGT TCAGGCCGAT ACCGTGTACT CGGACACCCA TGGCCAGTCT
GAAACGGTGT TCGCCTTCAC GCACTTGGCG GGTATCCAAC TGATGCCGCG CATCCGAAAC
TGGAAGGATC TGCGTTTCTA TCGCCCCGAG AAGGGGATGC GGTTCCGGCA TATCGACCGC
CTGTTCAGCG ACGTTGTGGA CTGGAAGCTC ATCCGCGACC ATTGGCGAGA TCTGATGCAG
GTATCGATAT CGATCCAGGC CGGAAAAATC GCCTCACCGA TGCTGTTGCG CAAGCTCAGC
CAAGAAGGGC GTCACAACCG ACTGTTTGCT GCGGCACGCG AACTTGGCCG CGTGCTGCGC
ACCGTCTACT TACTGCGTTG GATTTCCAGC AAGGAAATGC GACAGGAGGT GAGCGCAACG
ACCAACAAGA TCGAGTCATA CCATGCCTTC ACAAAATGGC TGGACTTCGG TGGCGACGTG
ATCAATGAGA ACGATCCGAA CGAGCAGCAA AAGCGGGTGC GCTTCATCGA TCTCGTTGCC
TCATCGGTGA TCCTGCAAAA CACGGTGGAC ATGATGAGGG TGTTGCAGGA AATGTACGCA
GATGGGGAGC CGGTTTCTGC GGCCGACGTT GAGTACCTGA GTCCCTACAT GACCTCGGGT
ATCAAGCGGT TTGGCAACTA TCACCTCGAC CTGAAGCGGC CCCCGGAGCC CTGGGTCAAG
GAATCACAGT TTCGTGAGGC GGCCAAGCGT GCACGAGCTG CGGCAGCTGC AGTGGCAGCG
GAGGGGCAGC GAGCCGGCCA AAAGGGAGCA GGAGCATGA
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| Protein sequence | MASIERTAYP RFPRILTLKD LQASFTPKPE EIEWAQQQSR TPQRRLALLV LLKCFEFLRH
FPALDAIPAE VVENISATLG VAPTDKIEFA SLATLYRHHK VIRELLGVKP YTDGQTRRLA
IQIAQQVANV VETRVDIINI TIEELVRLGY ELPVFRTLDE ISEQAHSAAE AALNARINQR
LSSAQRTWLD RLLESELPAR RTLYNQIKKS AKKASRKHLD LLLDQLTWLE SLPDSDALLD
GIPVTKLNYM AGMASALDAG DMKDLLPAKR YTLILALIRQ MRVRARDDVA EMFIRRIGAI
HRTAREELQV IQARQRELSE ELVATLEQVL EILAENLDDA STGQRVRDLL APHGSLDQLT
MDCEAIRVWS GGNHLPLVWK AFSSWRAAMF RMAKALRFEA ATQDRSLLDA LQVVLANEHR
KVEWIEDDLA LSFASERWRK LVRRSHGLGH PTNRRYLEVC VFSYLCGDLR SGDVCIEGSE
SFADYRLQLL PWKECEAQLP TYCDRIGIPA TAGDFVDGLK QLLTETAKKI DDEFPQHAGD
VVIGSNGEPT LRRVAAREVP ASAIALHAAI ENRTAPRNLL DVLANIEHWT GFTRNFGPQS
GDDPKLRNAR ERYLLTVFAM GCNLGPNQAA RHLSNGVTPH QLSYANQRHM SLDQLDNACR
DLTELYLRLE LPKLWGEGKK VAADGTQHDF YDQNLLVGMH FRYRRMGAVA YRHVADNYIA
VFRHFIPPGV LEAVYVIEGL MKAGLSVQAD TVYSDTHGQS ETVFAFTHLA GIQLMPRIRN
WKDLRFYRPE KGMRFRHIDR LFSDVVDWKL IRDHWRDLMQ VSISIQAGKI ASPMLLRKLS
QEGRHNRLFA AARELGRVLR TVYLLRWISS KEMRQEVSAT TNKIESYHAF TKWLDFGGDV
INENDPNEQQ KRVRFIDLVA SSVILQNTVD MMRVLQEMYA DGEPVSAADV EYLSPYMTSG
IKRFGNYHLD LKRPPEPWVK ESQFREAAKR ARAAAAAVAA EGQRAGQKGA GA
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