| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1840 |
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| Symbol | |
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| ID | 4671957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1920037 |
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| End bp | 1922040 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639838928 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_986103 |
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| Protein GI | 121594207 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.286624 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCGCA CCGCAACGCC CGGCGCGCAT CCTTCCGCGG GTGCCGCGCT GGCGCTGACC
ACGGCAGGCG TCGTCGCCCA GGCCCACGCC CGCTCGCAGT CGTTCGGGCT GCAGCCCCAT
GAGCAGGCCG ACCTGCACCT GCTGGACCGC CAGACCCTGG CCTGGACCGT GGCACGCAAC
GAGGCCCTGT GCGCCCATGC GCGGCCCGTC ATGGAAACCC TGGCGCAGCA GCTGCGCGGC
ACGCAGAGCA TGGTGATGCT GACCGACGCG CAGGGGGTGA TCCTGCATGC CGAGGGCGAT
GATGCCTTCC TGGACCGCGC CGGCCGCGTG GCCCTGCAGC CCGGTGCGGG CTGGTCGGAG
CGCAGCAAGG GCACCAACGC CATTGGTACG GCGCTGGCCC TGGGCGATGC GGTGCAGATC
AACGGGCGCC AGCATTACCT GGAAGCCAAC CAGTTCCTCA CCTGTTCATG CGCTCCCATC
CTGGATCCGC AGGGGCAGAT CCTCGGCGCG CTGGACGTGA GCGGCGACCG CCGCGGCCAC
AGCGCCCACA CGCTGGCGCT GGTGCGCATG TCCGCCGCGA TGGTGGAGAA CCACCTCTTC
GGCAAGGTGT ACGAGGATGC CGTGCGCCTG CGCTTTCATG CGCGCGCGGA GTTCCTGGGC
ACGCTCATGG AAGGGCTGGC GGCGTTCACC CCGCAGGGGC GCTTTCTGGC AGCCAACCGC
AGCGCGCAGT TCCAGCTGGG GTTGTCGGGA CCGGCGCTGG CGGCACACAC CTTCACCTCG
CTGTTCGGCC TGTCGATGGG CGCGCTGCTG GAGCATGCGC GCCGCTCGGT GCCCACGCTG
CTGGCGCTGC AACTGCCGGC AGGCGTGTCG GTGCACGCAC AGGTGGAGTT TGCGCCACGC
GGCGGCGTCA CGCTGCCGGT GTGCCCGGAC GGCCCGGCCG AGGCCCCGCC GCCGCGCGCG
CGGCCCGCAG CGGCCCCCGG CCTGTCCAGC CTGCGCTACC TGGACACGGG CGATGCCCAG
CTGGCGCAGG TGATCGAGCG CGTCACGCGG CTGCTGGGGC GTGGCGTGCC CACGATGATC
CTGGGTGAGA CGGGCACCGG CAAGGAGCTG CTGGCGCGTG CCATCCATAA CGACGGCCCG
CGCGCGCGGG GGCCCTTCGT GGCGGTGAAC TGCGCGTCCA TTCCCGAGTC GCTGATCGAG
GCCGAGCTGT TCGGCTACGA AGAGGGCGCC TTCACCGGCG CGCGCCGCAA GGGCAGCGTG
GGCAAGATCG TGCAGGCGCA CGGCGGCACG CTGTTCCTGG ACGAGATTGG CGACATGCCG
CTCGCCATGC AGGCGCGGCT GCTGCGCGTG CTGCAGGAGC GCAGCGTGGC GCCTCTGGGC
AGCACGCGGC AGATCGAGGT GGACGTGAAC GTGGTCTGCG CCACGCACCG CAACCTGCGC
GCCATGATGG CCGACGGCCA GTTTCGTGAC GACCTGTACT ACCGGCTGAA CGGCCTGGTA
GTGCGACTGC CTGCGCTGCG CGAGCGCACG GACCTGGCGG TGATCGTGCA GCGGTTGCTG
CGCGCCCAGC ATGACTCTCC CGCCGCAGAC AGCCCCATAC CGGTGGCGCC CGAGGTGATG
GCGCTGTTCG CCGCCCACGC CTGGCCGGGC AACCTGCGCC AGCTGTCCAA CGTGCTGCGC
ACGGCGGCGC TGTTGGCCGA GGGCGCGGAC GCGATCACGT GCGCGCACCT GCCGGAGGAC
TTCCTGGAGG AATGCGAGGC GCTGGCGCAG CAGGGCCGCG TGGTGGCGCA GGCGTTCTCT
CAGCCGGCGG TGCCGCCAGC GGACGGCGCG CGTGCCGCGG CCCCGGCCCC GGCCAGCGTG
CGGCCGCTGG GCGATGTGGC GGCCCATGCG CTGCAGCAGG CACTGGATGC GCACGCGGGC
AATGTCTCCG CCGCCGCGCG CGCGCTGGGC GTGTCGCGCA ACACGGTGTA CCGCTACCTG
CGCGCGCAGT CGTGTCGCTC CTGA
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| Protein sequence | MHRTATPGAH PSAGAALALT TAGVVAQAHA RSQSFGLQPH EQADLHLLDR QTLAWTVARN
EALCAHARPV METLAQQLRG TQSMVMLTDA QGVILHAEGD DAFLDRAGRV ALQPGAGWSE
RSKGTNAIGT ALALGDAVQI NGRQHYLEAN QFLTCSCAPI LDPQGQILGA LDVSGDRRGH
SAHTLALVRM SAAMVENHLF GKVYEDAVRL RFHARAEFLG TLMEGLAAFT PQGRFLAANR
SAQFQLGLSG PALAAHTFTS LFGLSMGALL EHARRSVPTL LALQLPAGVS VHAQVEFAPR
GGVTLPVCPD GPAEAPPPRA RPAAAPGLSS LRYLDTGDAQ LAQVIERVTR LLGRGVPTMI
LGETGTGKEL LARAIHNDGP RARGPFVAVN CASIPESLIE AELFGYEEGA FTGARRKGSV
GKIVQAHGGT LFLDEIGDMP LAMQARLLRV LQERSVAPLG STRQIEVDVN VVCATHRNLR
AMMADGQFRD DLYYRLNGLV VRLPALRERT DLAVIVQRLL RAQHDSPAAD SPIPVAPEVM
ALFAAHAWPG NLRQLSNVLR TAALLAEGAD AITCAHLPED FLEECEALAQ QGRVVAQAFS
QPAVPPADGA RAAAPAPASV RPLGDVAAHA LQQALDAHAG NVSAAARALG VSRNTVYRYL
RAQSCRS
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