| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1829 |
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| Symbol | |
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| ID | 4672544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1904823 |
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| End bp | 1905725 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639838917 |
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| Product | putative transmembrane protein |
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| Protein accession | YP_986092 |
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| Protein GI | 121594196 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0739498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.248165 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGCTC AGGGCCCCGC GCGCAGCATC CTTACAATGG CGCCATGCGG CCGCTCCATG
GAGGTGCCGC CGCCGTCGCA TACCCTTAAT CCAAGAGCTG CCGCCATGCC GCGTTTTCCC
CTGCCTTTGA TTTCTGCCCT GCTCGCCGCC GGCCTGCTGG CTGCCTGCTC CAGCACGCCT
GAAGACAAGA CCGCTGGCTG GAGCACCGAC AAGATTTATT CGGAAGCACG CGACGAGCTC
AATGGCGGCT CTTACGACAA AGCCGTGCCG CTGCTGGAAA AGCTGGAAGG ACGCGCCGCC
GGCACGCCGT TGGCACAACA GGCCCAGTTG GAAAAGGCCT ACGCGCAATA CAAGGGCGGC
GAGAAGGCGC AGGCTATTGC CACGCTGGAC CGCTTCATGA AACTGCACCC CGCCAGTCCC
GCGTACGACT ATGCGCTGTA CCTCAAAGGC TTGGTGAATT TCAACGACAA CCTGGGCCTG
TTCTCGTGGC TCTCGCGCCA GGATCTGTCG GAGCGCGACC AGAAGGCCGC CAAGGACTCG
TTCGAGTCCT TCCGCGAACT GGTGACCCGC TTCCCCGAGT CGCGCTACAC GCCCGACGCG
CGCCAGCGCA TGACCTACAT CGTCAACTCG CTGGCGCAGT ACGAAGTACA CGTGGCGCGC
TACTACTATG AGCGCGGTGC GTATGTGGCC GCCGTGAGCC GCGCGCAGAG TGCGGTTGCC
GACTACAAGG ACGTACCGGC GACGGAAGAG GCTCTGTACA TCCTGGTTCG GTCGTACGAC
GCGCTGGGGC TCACGCAACT GCGTGACGAC ACGCGCCGCG TGATGGATGC GTCCTATCCC
CAGAGCAGCC TGCCGCAGAC GGGATTCAAG GCGAAGGCGA ACCCCTGGTG GAAGTTCTGG
TAA
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| Protein sequence | MLAQGPARSI LTMAPCGRSM EVPPPSHTLN PRAAAMPRFP LPLISALLAA GLLAACSSTP
EDKTAGWSTD KIYSEARDEL NGGSYDKAVP LLEKLEGRAA GTPLAQQAQL EKAYAQYKGG
EKAQAIATLD RFMKLHPASP AYDYALYLKG LVNFNDNLGL FSWLSRQDLS ERDQKAAKDS
FESFRELVTR FPESRYTPDA RQRMTYIVNS LAQYEVHVAR YYYERGAYVA AVSRAQSAVA
DYKDVPATEE ALYILVRSYD ALGLTQLRDD TRRVMDASYP QSSLPQTGFK AKANPWWKFW
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