| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1828 |
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| Symbol | |
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| ID | 4672506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1902794 |
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| End bp | 1904860 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639838916 |
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| Product | helicase c2 |
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| Protein accession | YP_986091 |
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| Protein GI | 121594195 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.147958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.434412 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTGA GCGATCTCGT CCTCCCGGTG TTTGCGCCCG ACGGACCCCT GGCGCGTGTG
CGGCCTCATT TGCGTTCCCG CCCGGGGCAG GCGGCCATGG CCCTCGCGGT GGCGCAGGCC
ATCAACGCCC GGGAGTCACT GGTGGTGGAA GCGGGAACGG GGATTGGCAA GACCTTTGCC
TATTTGGTTC CCGCACTGCT GAGCGGCGAG CGTGTGCTCA TTTCCACGGC CACCAAGACA
CTGCAGGACC AACTGTTGAC GCGCGACCTG CCGCTGCTGC AGCAGGCGCT GGCGCTCCCG
CTACGCGTAG CGGCCCTCAA AGGCCGGGCC AATTACCTTT GCCTTTACCG ACTGGAGCAG
GCGCGTCGCG ACGGGGAGGG GCATGACGAA GCAGTCGCCC ACGATCTGGC GTGTGTTGAG
CGATGGGCCC AGTCCACGCG CAGCGGAGAC CTGGCGGAGG TCCCCGGTCT GGATGAATAC
TCAGCCGCCT GGAGGCAGGT CACTTCGACG GTAGACAACT GCCTGGGTTC CATGTGCCCG
CGGTTGCGCC AATGCCATGT CTACCGCGCA CGGCACGACG CGCAGGCGGC GGATGTGCTC
ATCATCAACC ACCACCTGTT CTTTGCGGAC CTCGGTGCGC AGGGGGCGGG GGCCGCGCAA
CTGCTACCGG ACACCGGGGT CGTGGTGTTC GATGAAGCCC ACCGGTTGGC CGAGATCGCG
GCCCAGTTCC TGGGCACGCA TGTCAGCACC AGCCAGCTGC TGCAACTTGG GCAGGATGTG
GTGGCGGCTG GGGCGCGGCA TGCGCGCGGC GCTGCGGATT GGCAGGGGTT GCTCCAGCAC
CTGCGCCAGT GCGCGCACGC GCTGCGTCTG GCGGTCGCTC CGGGCGAAGA TGCCGATGCA
GCCGGCTCCC GCATCGCCTG GACGGGCGTC ACGCCCGAGG CCTTGGATCC GTCTGCCTGG
GACGGTGCGC TGGAGGGGGC GGTGGCGGCA CTCCGCGCGG TGCTGGCCGC ACTGGACGGC
GTGGCGCAGC ACGCTCCCGA TCTGGCCCAC CTGCACAGCC GGACGGTCGC GTTGCTGGAG
CGTGTACTGC ATTTCTGTTC CGAGGCGGAC GCTGGCACGG TGCGCTGGGT TGAATCTGCA
GGTGCGTTGC GCATGGTGGA AACGCCCCTG GATGTGGCCG GCGCCCTGCG CACGCTGTGG
AAGGGAAAGC CCCCCACGCA GGGCGCCTGG GACGAGAGCG ACGAACCGCC TGCCGCGTCC
GCACCGCGTT CGTGGATCTA TACCTCCGCC ACGCTGGGCG ATGGCAAGGA CCTGCGCTGG
TTTACCGATG CCTGTGGATT GGAGGGCGCT CGTACCCTGC AGGTGCCTAG CCCCTTCGAC
TACGCACGGC AGGCGGCGCT GTATGTGCCA CCCGCACTCC CGCTGCCTTC CGACGCGGGG
CACAGCGTTC AGCTTGCGCG CTGGGTGGGT GATGCCGTAG CACGGCTTGG CGGGCATACG
CTGGTGTTGA CCACCAGTCT GCGGGCGCTT GCGGTGATCG CGGATGAGCT ATGCCGCCGG
TTCGCGCCCG GCGGCGGCAT CGAGGTGCTG GTGCAGGGAC ATGCCTCACG GTCGCGCATG
GTGGAGCGCT TTCGTGCCCA GCTTGACGCG AGCGGCCGGC CGGCGGGCCA TGTGCTCGTG
GGGGCGGCGT CGTTCTGGGA GGGGATCGAC GTGCCAGGCG AGGCCCTGCA GATGGTGGTG
ATCGACAAGC TGCCATTCCC CGCTCCGGGT GACCCGTGGG AGCAGGCGCA GGCACGGCGG
CTGGCGGACC AGGGTGGCAA CGTGTTCCGC AGACACGCCC TGCCATCGGC GGCAGTGGCG
CTCAAGCAGG GGGCCGGCCG GCTGATCCGC AACGAGAACG ACCACGGCAT ACTGGTCATC
GCCGACACAC GCCTGTTGCA CAAGGGCTAT GGCAAGCCTC TGCTGCGGGC ATTGGCCCCC
ATGCGGAGGC TGCATACGCA GGAAGAGTTC GGCGCGGCGC TGGATGCCCT TACCAGAACT
TCCACCAGGG GTTCGCCTTC GCCTTGA
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| Protein sequence | MSLSDLVLPV FAPDGPLARV RPHLRSRPGQ AAMALAVAQA INARESLVVE AGTGIGKTFA
YLVPALLSGE RVLISTATKT LQDQLLTRDL PLLQQALALP LRVAALKGRA NYLCLYRLEQ
ARRDGEGHDE AVAHDLACVE RWAQSTRSGD LAEVPGLDEY SAAWRQVTST VDNCLGSMCP
RLRQCHVYRA RHDAQAADVL IINHHLFFAD LGAQGAGAAQ LLPDTGVVVF DEAHRLAEIA
AQFLGTHVST SQLLQLGQDV VAAGARHARG AADWQGLLQH LRQCAHALRL AVAPGEDADA
AGSRIAWTGV TPEALDPSAW DGALEGAVAA LRAVLAALDG VAQHAPDLAH LHSRTVALLE
RVLHFCSEAD AGTVRWVESA GALRMVETPL DVAGALRTLW KGKPPTQGAW DESDEPPAAS
APRSWIYTSA TLGDGKDLRW FTDACGLEGA RTLQVPSPFD YARQAALYVP PALPLPSDAG
HSVQLARWVG DAVARLGGHT LVLTTSLRAL AVIADELCRR FAPGGGIEVL VQGHASRSRM
VERFRAQLDA SGRPAGHVLV GAASFWEGID VPGEALQMVV IDKLPFPAPG DPWEQAQARR
LADQGGNVFR RHALPSAAVA LKQGAGRLIR NENDHGILVI ADTRLLHKGY GKPLLRALAP
MRRLHTQEEF GAALDALTRT STRGSPSP
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