Gene Ajs_1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1827 
Symbol 
ID4672492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1901820 
End bp1902623 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content65% 
IMG OID639838915 
Productprotein phosphatase 2C domain-containing protein 
Protein accessionYP_986090 
Protein GI121594194 
COG category[T] Signal transduction mechanisms 
COG ID[COG0631] Serine/threonine protein phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.179821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.768093 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAG CGTTCCGCCT CATTGCGTCG ACCGGCATCC ACAAGGGTGA CCGCGAGTAC 
CAGCAAGACC AGGTCGCCCT GCTGTCGCAC CCGCGTTTCA ATGGATGCGT ACTGGGCGTG
GTGGCCGATG GCATGGGTGG CCGCAGCGGA GGGCGCAAGG CGTCCGACCA GGTGATGCTC
ACCGCGCGCC AGTTGTTTGA ACGCTATTCG CCAGAAACGG ACGACGCCGC CGCCCTGCTC
AAGCACATCG TAGAGGAGGC GCACATCGTG ATCCGCCTCA CCGCGATTTC CGCGGAACAG
GAACCACACA GCACCATCGC GGCATTCGTG ATCAACCCAC GCGGCGATTG CCACTGGGCC
CACGCAGGGG ACTCGCGCAT CTACCACTTC CAGGGGGGGC GGCTGGTGTT CCGCACCAGC
GACCACTCCT ATGTGCAGGC GCTCGTGGAC CGTGGCGAGA TCACGGAAGC CGAGGCCAAC
ACCCACCCCC ACTCCAACAT CCTCGTCGGC TGTCTGGGCA CCGAGAGCGA CCCTCCCATC
ACCACCCACC TGATTCCGCA GATGCAGCCG GGCGACGTGC TGTTGGCCTG CAGCGACGGC
GTGTGGCACT ACTTCTCACC TGCGGAACTG GCGTCGGTCC TGGATTCGCT GACGCCGCGC
GAGGCCACCG AGTTCCTCAT CGACAAGGCG CGCTCGCGCG CACGCGGGGG CGGCGACAAC
CTGTCGCTCG CCATCGTGAA GATCGAAACG CTGGTAGAGG AAAAGAAGCC TCCACGCTTG
GCGCAACTCA CACCCGCCAC CTAA
 
Protein sequence
MTKAFRLIAS TGIHKGDREY QQDQVALLSH PRFNGCVLGV VADGMGGRSG GRKASDQVML 
TARQLFERYS PETDDAAALL KHIVEEAHIV IRLTAISAEQ EPHSTIAAFV INPRGDCHWA
HAGDSRIYHF QGGRLVFRTS DHSYVQALVD RGEITEAEAN THPHSNILVG CLGTESDPPI
TTHLIPQMQP GDVLLACSDG VWHYFSPAEL ASVLDSLTPR EATEFLIDKA RSRARGGGDN
LSLAIVKIET LVEEKKPPRL AQLTPAT