| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1822 |
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| Symbol | sucA |
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| ID | 4673264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1894185 |
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| End bp | 1897061 |
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| Gene Length | 2877 bp |
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| Protein Length | 958 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639838910 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_986085 |
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| Protein GI | 121594189 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.549181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATC CGACATCCGT CTACCAAGCC TACCAAGGCA ACACCTATCT TTTCGGCGGC
AACGCGCCCT ACGTCGAAGA GATGTATGAG AACTACCTTG CCAACCCTGG CAGCGTGCCA
GACTCCTGGC GCGAATACTT TGACGCACTG CAACATGTGC CCGCGGTAGA CGGCAGCAAT
GCCAAGGACG TTCCCCACCT GCCCGTCATC AACGCCTTTG CCGAGCGTGC CAAGGCCGGC
GGCACCAAGG TCGTGGTGGC CAGCGCCGAC GCCGAGATGG GCCGCAAGCG CACCGCCGTC
CAGCAACTGA TCGCCGCGTA CCGCAACGTG GGCCAGCGCT GGGCCGACCT GGACCCCCTC
AAGCGCACCG AGCGCCCCCA GATTCCCGAA CTGGAGCCGT CGTTCTACGG CTTCAGCGAT
GCCGACCAGG AAACGGTGTT CGACGCGAGC AACACCTTCT TCGGCAAGGA CAAGATGCCC
CTGCGCGAGC TGCTGAACGC GCTGCGCGAG ACCTACTGCG GCACCATCGG CGTGGAGTAC
ATGTACGCCA CCGACCAGGT GCAAAAGCGC TGGTGGCAGC AAAAGCTGGA AAGCATCCGC
AGCAAGCCCA ACTTCTCTGC CGACAAGAAA AAGCGCATCC TGGAGCGCCT GACGGCCGCC
GAAGGCCTGG AACGCTATCT GCACACCAAG TACGTGGGCC AGAAGCGCTT CTCGCTCGAG
GGGGGCGAGT CCTTCATCGC CGCCATGGAC GAGTTGATCA ACTCCGCAGG CGCGAAGGGC
GTGCAGGAAG TGGTGATCGG CATGGCCCAC CGCGGCCGCC TGAACGTGCT GGTCAACACC
CTGGGCAAGA TGCCCAAGGA CCTGTTCGCC GAGTTCGACC ACACCGCCCC CGAGGACCTG
CCCGCCGGTG ACGTGAAATA CCACCAGGGC TTCAGCTCCG ACGTCTCCAC GGCCGGCGGC
CCGGTGCACC TGTCGCTCGC GTTCAACCCC TCGCACCTAG AAATCGTCAA CCCGGTGGTC
GAGGGCTCCG TGCGCTCGCG CATGGACCGC CGCGGCGACC CCAAGGGGAA ACAGGTGCTG
CCCGTGCTGG TGCACGGTGA CGCGGCCTTT GCCGGCCAGG GCGTGAATCA GGAAACCCTG
GCCCTGTCCG AAACCCGTGG CTACACCACG GGCGGTACGG TGCACCTGAT CATCAACAAC
CAGATCGGCT TCACCACGTC CGATCCGCGC GACCTGCGCT CTACGCTGTA CTGCACCGAC
ATCGTGAAGA TGATCGAGTC GCCCGTGCTG CACGTGAACG GTGACGATCC TGAGGCCGTG
TGCCTGGCCA TGCAGCTGGC GCTGGATTTC CGCATGGAAT TCGCCAAGGA CGTGGTGGTG
GACATCATCT GCTACCGCAA GCTGGGCCAC AACGAGCAGG ACACGCCGGC GCTGACCCAG
CCGCTGATGT ACAAGAAGAT CGGTCAACAC CCCGGCACGC GCAAGCTCTA CGCCGACAAG
CTGGCAGCCC AGGGTCTGGG CGAGACGCTG GGCGACGACA TGGCCAAGGC CTATCGCGCC
GCCATGGACG AGGGCAAGCA CACGGTTGAT CCGGTGCTGA CCAACTTCAA GAGCAAGTAC
GCCGTGGACT GGAGCCCCTT CCTGGACCAG AAGTGGACCG ATGCCGGCGA CACCGCCATC
CCGCTGGCCG AGTGGAAGCG CATCGCCGAG AAGATCACGA CCATTCCGGA GACCGTCGCA
CCGCACCAAC TGGTGAAGAA GGTCTACGAC GACCGCGCCG CCATGGGCCG TGGCGAGGTC
AACGTGGACT GGGGCATGGG CGAGCACATG GCCTTCGCAT CGCTGGTGGC ATCGGGCTAT
CCCGTGCGCC TGTCTGGCGA GGATTGCGGC CGCGGTACGT TCACGCACCG CCACGCCGTG
ATTCATGACC AAAAGCGTGA GAAGTGGGAC GAAGGCACCT ACATCCCGCT GCAGAACGTG
GCCGAGAACC AGGCGCCGTT CACGGTGATC GACTCCATCC TGTCCGAGGA GGCCGTTCTG
GCCTTCGAGT ACGGCTACGC CTCCAACGAC CCCAACACGC TGGTGGTCTG GGAAGCGCAG
TTCGGCGACT TCGCCAACGG CGCACAGGTG GTGATCGACC AGTTCATCGC ATCGGGCGAA
GTGAAGTGGG GCCGCGTGAA CGGCATCACG CTGATGCTGC CGCACGGCTA CGAAGGCCAG
GGCCCAGAGC ACAGCTCGGC CCGCCTGGAG CGCTTCATGC AGCTGGCCGC TGACACCAAC
ATGCAGATCG TGCAGCCCAC CACGGCGAGC CAGATCTTCC ATGTGCTGCG CCGCCAGATG
GTGCGCAACC TGCGCAAGCC CCTGGTCATC ATGACGCCGA AGTCGCTGCT GCGTAACAAG
GACGCCACGT CGCCGCTGTC CGAGTTCACC AAGGGCGGTT TCCAGACCGT CATCTCGGAG
CAGGACGAAG CGATCGCCAA GAAGGCCGAC AAGGTCAAGC GCGTGATCGC CTGCTCGGGC
AAGGTCTACT ACGACCTCGT GAAGAAGCGC GTGGAGAAGG AAGCTACCGA CGTGGCCATC
ATCCGCGTCG AGCAGCTCTA CCCGTTCCCG CACAAGGCCT TCGCCGCCGA GCTCAAGAAG
TACCCGAATG CCACCGACAT CGTGTGGTGC CAGGACGAAC CGCAGAACCA GGGCGCCTGG
TTCTTCATCC AGCACAACAT CCACGAGAAC ATGCTCGATG GCCAGAAGCT GGGCTATGCC
GGCCGCGCCG CATCTGCCTC CCCCGCAGTG GGTTACGCCC ATCTGCACCA GGAGCAGCAA
AAGGCCCTGG TGGAAGCCGC TTTCGCCAAG CTCAAGGGTT TTGTCCTGAC CAAGTAA
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| Protein sequence | MSDPTSVYQA YQGNTYLFGG NAPYVEEMYE NYLANPGSVP DSWREYFDAL QHVPAVDGSN
AKDVPHLPVI NAFAERAKAG GTKVVVASAD AEMGRKRTAV QQLIAAYRNV GQRWADLDPL
KRTERPQIPE LEPSFYGFSD ADQETVFDAS NTFFGKDKMP LRELLNALRE TYCGTIGVEY
MYATDQVQKR WWQQKLESIR SKPNFSADKK KRILERLTAA EGLERYLHTK YVGQKRFSLE
GGESFIAAMD ELINSAGAKG VQEVVIGMAH RGRLNVLVNT LGKMPKDLFA EFDHTAPEDL
PAGDVKYHQG FSSDVSTAGG PVHLSLAFNP SHLEIVNPVV EGSVRSRMDR RGDPKGKQVL
PVLVHGDAAF AGQGVNQETL ALSETRGYTT GGTVHLIINN QIGFTTSDPR DLRSTLYCTD
IVKMIESPVL HVNGDDPEAV CLAMQLALDF RMEFAKDVVV DIICYRKLGH NEQDTPALTQ
PLMYKKIGQH PGTRKLYADK LAAQGLGETL GDDMAKAYRA AMDEGKHTVD PVLTNFKSKY
AVDWSPFLDQ KWTDAGDTAI PLAEWKRIAE KITTIPETVA PHQLVKKVYD DRAAMGRGEV
NVDWGMGEHM AFASLVASGY PVRLSGEDCG RGTFTHRHAV IHDQKREKWD EGTYIPLQNV
AENQAPFTVI DSILSEEAVL AFEYGYASND PNTLVVWEAQ FGDFANGAQV VIDQFIASGE
VKWGRVNGIT LMLPHGYEGQ GPEHSSARLE RFMQLAADTN MQIVQPTTAS QIFHVLRRQM
VRNLRKPLVI MTPKSLLRNK DATSPLSEFT KGGFQTVISE QDEAIAKKAD KVKRVIACSG
KVYYDLVKKR VEKEATDVAI IRVEQLYPFP HKAFAAELKK YPNATDIVWC QDEPQNQGAW
FFIQHNIHEN MLDGQKLGYA GRAASASPAV GYAHLHQEQQ KALVEAAFAK LKGFVLTK
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