Gene Ajs_1820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1820 
Symbol 
ID4673600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1891855 
End bp1892841 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content68% 
IMG OID639838908 
Producthypothetical protein 
Protein accessionYP_986083 
Protein GI121594187 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.939306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGT TCCCGCATCG CCGCCGTGTA CTGGCTGCCA CCGCTGCGGC CGTCCTGTGT 
GCCGCGGCCG GCGCCGCCAA CGCACAGGCT CCCGCCTATC CTGCCAAGCC CGTCACTTTC
GTCGTGCCGT TTGCGGCCGG CAGTGCCACC GACCAACTGG CGCGGGCACT GGGCCAGGCC
GTGAGCACCG ATGCGCGGCA ACCCGTGGTC GTGGAGAACA AGGCCGGCGC CAGCGGCATG
ATCGCCGCGC AGTCCGTCGC CAAGGCACCG GCGGATGGGT ACACGGTACT CATCACCACC
AACACCACGC ATGCCGCGAA CGAACACCTG TACAAGAAAC TGCCCTACGA CCCGGTGAAG
GATTTCGCCC CCGTCACCGG CCTGGGCAAG GGCGGCCAGG TGCTGGTGGT GAACGCGGGC
GCTCCCTACA AGAACGTGGG CGACCTGCTG GCCGCCGCCC GCAAGAACCC CGGCAAGCTG
AGCTTTGGCA GCGGCAGTTC TTCCAGCCGC ATGGCCGGCG AGATGCTCAA GCAACTGGCG
GGGGTGGACA TCCTGCATGT GCCGTACAAG AGCAACCCGT TGGCCATCAC CGATCTGCTC
GGCGGGCAGA TCGACCTGAT GATCACCGAC ACGTCCACCG GCGTTCCTCA GGTCAAGGCG
GGAAAGCTGC GCGCGCTGGG GTACTCCACG CAAACGCGCA GCACGCAGCT GCCCGAGGTG
CCCACGCTGG ATGAGGCAGG CGTGAAGGGC TATGACATGG GCTACTGGTT TGCGGCCTAC
GTGCCCGCCG GCACGCCCGC GCCCGTGGTG GCGCGGCTGA ACGCGCTGCT GGCGCAGGCG
ACGAGGAGCC AGGCCGCCCA GTCGTTCTTC GAGACCGCAG GCTCCGAGGC CTGGACCACC
ACGCCCGAAG AGCTGGCGCG CTTTCAGGCC GCCGAGACCC AGAAGTGGGG CAGGGTGATC
AAGGCCGCCG GTATTGAGGC GGAATGA
 
Protein sequence
MNPFPHRRRV LAATAAAVLC AAAGAANAQA PAYPAKPVTF VVPFAAGSAT DQLARALGQA 
VSTDARQPVV VENKAGASGM IAAQSVAKAP ADGYTVLITT NTTHAANEHL YKKLPYDPVK
DFAPVTGLGK GGQVLVVNAG APYKNVGDLL AAARKNPGKL SFGSGSSSSR MAGEMLKQLA
GVDILHVPYK SNPLAITDLL GGQIDLMITD TSTGVPQVKA GKLRALGYST QTRSTQLPEV
PTLDEAGVKG YDMGYWFAAY VPAGTPAPVV ARLNALLAQA TRSQAAQSFF ETAGSEAWTT
TPEELARFQA AETQKWGRVI KAAGIEAE