Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1816 |
Symbol | |
ID | 4674316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 1888042 |
End bp | 1888908 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639838904 |
Product | UspA domain-containing protein |
Protein accession | YP_986079 |
Protein GI | 121594183 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00317647 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.851658 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACACCC ACGACACCGT GTATGCCTGC ATCGACGGGC TGGCCACCAC CCACGCCGTG GTGGACGGGG CCCTGTGGGC CGCGCAGCGC CTGCAGGCCC CCCTGGCGCT GCTGCACGCA CTGGAGCGGC CTGAACCCAT GCCGCCCGTG GGCGACTACA GCGGCGTCAT CGGCATGGGC GCGCAGGACC TGCTGCTGCA GCGCCTGAAT ACCCTCGATG AAGAGCGCAG CCACGTCGCT CAGGAGGCCG CGCGCCGCAT GCTGGCCGAG GCCCAGGCGC GCGTGGATGC CGCCCGCGTG CCGTCGCTGC AGGCGCTGCT GCGCCAGGGC GAGCTGACCG ACGTGCTGCT GGAGCACGAA CCCAGCGCGC GCCTGTTCGT GCTGGGGCGC CAGCACCGCG CCACCGCCGC GCGCAAGCTG CGGCTGGACT ACCGTGTGGA AGGCGTGGTG CGCAACGTGC GCCAGCCGGT GATGGTGGTG ACCATGCCGG AGTTCGTGGC GCCGGCGGGC TTCGTCGTGG CCTTTGACGG CAGCGCCACC GCGCGCCGCG CCGTAGAGGC CGTGGGCCGC AGCCCGCTGC TGCGCGGCAT GCCCGGCCTG TTGGCCCTGG CCGGCGAGCC CACGCTGGAG ATGCTGGAAG CGCTGCAAAG CGCCCAGTCA TACCTGGAGG CCACAGGCTT CGACATCACC ACGCAGATCG TGCCGGGCGT GCCGGAGGAG GCGCTGCCGG CCCTGCTGCA GTCGCACGGC AACGTACTGC TGGTGCTGGG CGCCTACGGG CACTCGCGCA TCCGCCAGCT CATCGTCGGC AGCACCACCA CCGCGCTGCT GCGGCTGTGC AGCGTGCCGG TGCTGGTGCT GCGCTGA
|
Protein sequence | MNTHDTVYAC IDGLATTHAV VDGALWAAQR LQAPLALLHA LERPEPMPPV GDYSGVIGMG AQDLLLQRLN TLDEERSHVA QEAARRMLAE AQARVDAARV PSLQALLRQG ELTDVLLEHE PSARLFVLGR QHRATAARKL RLDYRVEGVV RNVRQPVMVV TMPEFVAPAG FVVAFDGSAT ARRAVEAVGR SPLLRGMPGL LALAGEPTLE MLEALQSAQS YLEATGFDIT TQIVPGVPEE ALPALLQSHG NVLLVLGAYG HSRIRQLIVG STTTALLRLC SVPVLVLR
|
| |