| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1815 |
|---|
| Symbol | |
|---|
| ID | 4674382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 1886829 |
|---|
| End bp | 1887656 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639838903 |
|---|
| Product | hydroxypyruvate isomerase |
|---|
| Protein accession | YP_986078 |
|---|
| Protein GI | 121594182 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3622] Hydroxypyruvate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0352764 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCGCC TCGCTGCCAA CCTCTCCATG CTCTACGCCG AGCATGCCTT CCTGGACCGC
TTTGCCGCTG CCGCGTGCGA CGGCTTCCGG GGGGTGGAAT ACCTCTTTCC CTACGACCAT
CCTGCGGAGC AGATCGCGCA GCGCCTGGCC GAACATGGAC TGACGCAGGT ACTGTTCAAT
GCCCCGCCGG GGGACTGGGC GGCGGGCGAG CGCGGTCTGG CCTGTCTGCC GGGGCGCGAG
GCGCAATTCC AGGAGGGGCT GCAACAGGCG CTGCACTATG CGCAGGCGCT GCGCTGCGAG
CGCCTGCACG TGATGGCTGG CGTGGTGCCG CCCGGGCTGG CGCACGCCGA CGCACGCGCC
TGCTACCTGC GCAACCTGCG CTGGGCCGCC GGCCAGGCCG GGCGCCAGGG CGTGCGGCTG
ATGATCGAGC CCATCAACGG GCGCGACATG CCCGGCTACT TCCTGCAGCG CCAGCAGGAC
GCCCATGCCG TGCTGCAGGA ACTGGGCGCT TCCAACGTGC AGGTGCAGTT CGACCTGTAC
CACTGCCAGG TCATGGAGGG CGACGTGGCC ACGAAGATCC GCCACTACCT GCCCACGGGA
CGGGTGGGGC ATTTCCAGAT CGCCGGCGTA CCCGAGCGGC ACGAGCCCGA CCAGGGCGAA
CTGCAGGTCG ACTACCTGCT GGGCGTGATC GACGAGGTGG CGACCACCTG CGGTTTCGAC
GGCTGGGTGG GCTGTGAATA CCGTCCGGCG ATCGCGGGCC CGGGCGGCAC CTCGCAGGGG
CTGGCCTGGG CGCGGCGCTG GGGTGTCGTG CCGCGCGGCG CGGATTGA
|
|---|
| Protein sequence | MPRLAANLSM LYAEHAFLDR FAAAACDGFR GVEYLFPYDH PAEQIAQRLA EHGLTQVLFN
APPGDWAAGE RGLACLPGRE AQFQEGLQQA LHYAQALRCE RLHVMAGVVP PGLAHADARA
CYLRNLRWAA GQAGRQGVRL MIEPINGRDM PGYFLQRQQD AHAVLQELGA SNVQVQFDLY
HCQVMEGDVA TKIRHYLPTG RVGHFQIAGV PERHEPDQGE LQVDYLLGVI DEVATTCGFD
GWVGCEYRPA IAGPGGTSQG LAWARRWGVV PRGAD
|
|---|
| |