Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1797 |
Symbol | |
ID | 4673955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 1865808 |
End bp | 1866473 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639838885 |
Product | hypothetical protein |
Protein accession | YP_986061 |
Protein GI | 121594165 |
COG category | [S] Function unknown |
COG ID | [COG2860] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGCCGT CGGTGTCATT GCTGGACTCG TTCCAGTTCT CACAGTTCAC CACCCTGTTG GTGATCTACC TTGTGGCCAT CACGGCCGAG GCCATGTCTG GCGCGCTGGC CGCAGGCCGG CGCAACATGG ACATCTTCGG TGTCAGCGTG ATCGCCTTTG TGACCGCGCT GGGCGGCGGC ACCATCCGTG ACATGGTGCT GGGCCACTAC CCGATCGGCT GGACACAGCA CCCGGAATAT GTGTACCTGG TGATCTCGGC AGGCCTGCTG ACGACGGTGG TGGCGCGCTA CCTGCACCGG ATCAAGCGTG TGTTCCTGCT GCTGGACGCC ATGGGGCTGA TCGCGTTCTC GCTGATCGGA TGCAATGTGG CCCTGGAACT GGGCTACCCG CCCGTGGTGG TGGTGATGTC CGGCATGCTC ACGGGCATCA GCGGCGGCAT CCTGCGCGAC GTGCTGTGCA ACCAGGTGCC CGTGGTCTTT CGGCGCGAGC TGTACGCCAG CGTGTCCCTG GCCGTGTGCC TGCTGTTCCT GGGACTGCGC ACGATGGAAG TGGAAAACAA CCTCAGCACT TTGGTGTGTT TCGCCGCCGG CCTGGCGCTG CGGCTGCTGG CACTGCACTA CCACTGGCGC CTGCCGGTGT TCTCGTACCA GCAGCGCTGG GAATGA
|
Protein sequence | MLPSVSLLDS FQFSQFTTLL VIYLVAITAE AMSGALAAGR RNMDIFGVSV IAFVTALGGG TIRDMVLGHY PIGWTQHPEY VYLVISAGLL TTVVARYLHR IKRVFLLLDA MGLIAFSLIG CNVALELGYP PVVVVMSGML TGISGGILRD VLCNQVPVVF RRELYASVSL AVCLLFLGLR TMEVENNLST LVCFAAGLAL RLLALHYHWR LPVFSYQQRW E
|
| |