Gene Ajs_1797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1797 
Symbol 
ID4673955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1865808 
End bp1866473 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content64% 
IMG OID639838885 
Producthypothetical protein 
Protein accessionYP_986061 
Protein GI121594165 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCCGT CGGTGTCATT GCTGGACTCG TTCCAGTTCT CACAGTTCAC CACCCTGTTG 
GTGATCTACC TTGTGGCCAT CACGGCCGAG GCCATGTCTG GCGCGCTGGC CGCAGGCCGG
CGCAACATGG ACATCTTCGG TGTCAGCGTG ATCGCCTTTG TGACCGCGCT GGGCGGCGGC
ACCATCCGTG ACATGGTGCT GGGCCACTAC CCGATCGGCT GGACACAGCA CCCGGAATAT
GTGTACCTGG TGATCTCGGC AGGCCTGCTG ACGACGGTGG TGGCGCGCTA CCTGCACCGG
ATCAAGCGTG TGTTCCTGCT GCTGGACGCC ATGGGGCTGA TCGCGTTCTC GCTGATCGGA
TGCAATGTGG CCCTGGAACT GGGCTACCCG CCCGTGGTGG TGGTGATGTC CGGCATGCTC
ACGGGCATCA GCGGCGGCAT CCTGCGCGAC GTGCTGTGCA ACCAGGTGCC CGTGGTCTTT
CGGCGCGAGC TGTACGCCAG CGTGTCCCTG GCCGTGTGCC TGCTGTTCCT GGGACTGCGC
ACGATGGAAG TGGAAAACAA CCTCAGCACT TTGGTGTGTT TCGCCGCCGG CCTGGCGCTG
CGGCTGCTGG CACTGCACTA CCACTGGCGC CTGCCGGTGT TCTCGTACCA GCAGCGCTGG
GAATGA
 
Protein sequence
MLPSVSLLDS FQFSQFTTLL VIYLVAITAE AMSGALAAGR RNMDIFGVSV IAFVTALGGG 
TIRDMVLGHY PIGWTQHPEY VYLVISAGLL TTVVARYLHR IKRVFLLLDA MGLIAFSLIG
CNVALELGYP PVVVVMSGML TGISGGILRD VLCNQVPVVF RRELYASVSL AVCLLFLGLR
TMEVENNLST LVCFAAGLAL RLLALHYHWR LPVFSYQQRW E