| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1782 |
|---|
| Symbol | |
|---|
| ID | 4672594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 1849836 |
|---|
| End bp | 1851902 |
|---|
| Gene Length | 2067 bp |
|---|
| Protein Length | 688 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639838870 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_986046 |
|---|
| Protein GI | 121594150 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.374019 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAACC TACTTGTCGG CGCCTGGATC TATGCCGCAG CGTTTGGAGT CAGCGCGCTT
TCGCTTGGCG GCAGCCACGG CACAGTGGTT CTGGGGTCCA CGATCGATCT CACCTTCGAG
GTACGGCCTG ATCCCGGCAA GACCGTCGCG TCTTCCTGCC TCGGGGCGCG GCTGGTCTTA
GGCGCAACCA CTGTCCCCGA AACGCGTGTG CATGTCACTC CCCTGGAAGG AGGCGCCATT
CCGATGGTGC GCGTGCAGGC GCTCATTCCC GTGGATGAGC CGGTGCTGAC TGCCACGCTC
ACGGCCGGCT GCGAAGGGCG TGTGTCGCGC ACCTACACGT TCTTGGCAGA CCCGCCCGGC
ACTGCACCCC CAGCGGCACG GCAGCCCATC GATCTGTCGC GCCTGGCGGT GCCCGGACCA
CGCGCTACAC CGCAGGTGCG GAGTGCATTG GGTGGCGAGG GGGAGGGCGC ACGCACGGTC
CGGCGGCCTC GTGCGCAGCC GCGTGTTCCC GCGGCGTCCA CGCATGCCCC GGCCGAGCGG
GCGACACGCC CATCCCGGGC AGCTAAGACC GCCACGACGC TGCGCACCAG CGCCAAAGTC
TCGCCGCCCG CGGCTGCGGC GGCTCCCTCC CGCCTGGTAA TGGAACCCCT GGATTGGGGT
CCCGACAATG CCTCCGCGCT GCAACTCACG CGCGAGCCGC CCCAGATGTC GCCGCGCCCC
AGCGAGGCCT TGCGTGCGGA GTCGGCCGCG TGGTGGCAGG CGCTGGACAC TTTGACCGCC
CAAACACAGC GGTTTGAAGA GCGGCTCAAG AGGCTCGAGG CCGATGCGGC CGCGCAGGGC
CAGCTGGTGG AGCGCGAGCG CGCAACGGCG GCTGAGCTGC GCGAGCGCCT GGCGCAGGTG
GAGTCGCAGG GGTTCCCCGC GACCGTGGTG TACATGCTCG CGGGGCTGCT GGTGCTCGCG
CTGGCCTGCA TTGCCTGGCT GCTGCGCCGC ACGCGGCGCG AGGCGCTGCA GGCATGGCGT
GACTCGGTGG CACTCAGCGG TGGCCTGCGG GACGGGGCCG TGGCCGCGGA AGGCCCGGAC
GGCAAGCTCC GGCTGCAGGT GGAGCCGGAT GCGCGCGATG TCTGGCAGCC GACAGCGCCG
CCGCCGCAAG GGCCGGACAG TGGGCCGCTT CCGCTCGCGC CTACCGCAGC GCCAATGGCT
GCACCCGTGG CGGCTCCAGG CCCCGCGGTG GCGCCGCCGA CTGTGGAGCC CTTGCAGGCA
AGGGCCCAGT CCGGTGTGCA GCCCGAGTCG CTGTTCGATC TGCAACAGCA GGCTGAATTT
TTCACCTCGG TGGGCGAGCA CGAGCAGGCG ATCCATGTGC TGCGCCAATA CATCGCGCAG
CACGGCGAAG ACTCGCCGCT GGCGCATCTC GAACTGCTGC GCCTGTACCA CCAACTGGGG
CGAACCGACA GCTTCGACGG CCTGCGCGCG CAGGTCGAGG AGCGGTTCAA TGTACGCGTG
CCTCCATTTG CACAGTTCCA GCAACTGGGC CGGAGCCTGG AAGACCACCC CGAGGCGCTG
GCACGGGTCG AGGCGGCATG GTCCTCGCCC GAGGTCCTGG CCGTGCTGGA GGGCCTCTTA
TTTCACCGGG GACAGACGCA GGGCGAGGGG CCCTTCGACC TGGCGGCGCT GGACGATCTG
CTGCTGCTGC TGCTGTCCAT CGCCCAGACC ACACCCGCAC ATTTGCGCGG TGCGCCGCCG
CCCCGCGCGC GCACCACCCC GCGCACCACC CCGCGTGCCA CGCCAGCGCT CCACCCGATG
GGCGCGCAGG ATGGGACGGG CCGGTCGTTG GACTCGATGG CGGCCGGCCT GGCGCTGCTG
CCGGTGGATG ACGGCTCGCC AGCATCCACT TGCGTCGCCG CGGTGGACGT GGACGTGTCC
GGGCTGCCTC ACATCACCCT CAGCGATCTA CCGCCCGTGC CCGTCACCCC GGCGCCCGCG
CAAGGGCAGG CCGTGGGTTT TGGCATGGAA AACGACAAGC TGGAGTTGCG CTTCGAACTG
GAGCAGTCGC AAAAGAACCG CTTCTGA
|
|---|
| Protein sequence | MRNLLVGAWI YAAAFGVSAL SLGGSHGTVV LGSTIDLTFE VRPDPGKTVA SSCLGARLVL
GATTVPETRV HVTPLEGGAI PMVRVQALIP VDEPVLTATL TAGCEGRVSR TYTFLADPPG
TAPPAARQPI DLSRLAVPGP RATPQVRSAL GGEGEGARTV RRPRAQPRVP AASTHAPAER
ATRPSRAAKT ATTLRTSAKV SPPAAAAAPS RLVMEPLDWG PDNASALQLT REPPQMSPRP
SEALRAESAA WWQALDTLTA QTQRFEERLK RLEADAAAQG QLVERERATA AELRERLAQV
ESQGFPATVV YMLAGLLVLA LACIAWLLRR TRREALQAWR DSVALSGGLR DGAVAAEGPD
GKLRLQVEPD ARDVWQPTAP PPQGPDSGPL PLAPTAAPMA APVAAPGPAV APPTVEPLQA
RAQSGVQPES LFDLQQQAEF FTSVGEHEQA IHVLRQYIAQ HGEDSPLAHL ELLRLYHQLG
RTDSFDGLRA QVEERFNVRV PPFAQFQQLG RSLEDHPEAL ARVEAAWSSP EVLAVLEGLL
FHRGQTQGEG PFDLAALDDL LLLLLSIAQT TPAHLRGAPP PRARTTPRTT PRATPALHPM
GAQDGTGRSL DSMAAGLALL PVDDGSPAST CVAAVDVDVS GLPHITLSDL PPVPVTPAPA
QGQAVGFGME NDKLELRFEL EQSQKNRF
|
|---|
| |