| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1781 |
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| Symbol | |
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| ID | 4672654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1848239 |
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| End bp | 1849759 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639838869 |
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| Product | 3-hydroxy-acyl-CoA dehydrogenase |
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| Protein accession | YP_986045 |
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| Protein GI | 121594149 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACGG TCTTCACTTC AATCGGCATC GTGGGCACTG GCGCCATGGG CCGCGGCATC
GCGCAGATCG CCGCCCAGGC AGGCAGCACG GTCTACCTCT ACGACACCCA TGGCGGCGCC
GCCGACGCCG CCCGCACCCA CATCCACCAG CAGTGGCAGC GTCTGGTGGA CAAGGGTCGG
CTGGACGAGA GCCTGTTGCC GGCTCTGGAG CAGCGGCTGG TTCCCGTCAC GTCGCTGCAC
GACTTCGCGG CTTGCGAATT GGTGGTGGAA GCCATCGTCG AGCGACTGGA TGCCAAGCAG
GAACTGCTCA AACAGCTCGA AGCCATCGTC TCGCCCGAAG CCGTGCTGGC CAGCAACACG
TCATCGCTGT CCATCACCGC CGTGGCCGCA CCGCTGCAGC GGCCGCAGCG CATGGCAGGC
TTTCACTTCT TCAACCCGGT GCCGCTGATG AAGGTGGTCG AGGTCGTGGC CGGCCTGCGC
ACGGACCCCC ATGTCTGCAC CCGCTTGGCC GGCTATGCGC GCGCCATGGG CCACACCCCG
GTGATGGCGC AGGACACGCC GGGCTTCATC GTCAACCATG CGGGGCGGGG CTATGGCACC
GAGGCGCTGC GCATCGTGAG CGAGGGCGTG GCCGATTTCG CCACCGTGGA CCGCATCCTG
CGCGACCAGG TGGGTTTCAA GCTCGGCCCC TTCGAGTTGC TGGACCTCAC AGCGCTCGAT
GTGTCGCACC CGGTCATGGA GTCGATCTAC CGCCAGTACT ACGACGAGCC GCGCTTTCGC
CCCAGCGTGA TCACGGCGCA GCGCTTGAGC GGCGGCCTGC TGGGCCGCAA GTCCGGCGAG
GGCTTTTACC GCTACGTGGA CGGTGCGCCC GAGCTGCCGG CCGAGCCGCC GGTGCCGGAG
GTATCGGGCC TGCCGCCGGT CTGGGTCTCC ACACGCGCCG CCCGCCGCGC CGAGCTGTAC
CAGTTGCTCA AGGACCTGGG GGCAACGATC GAGACGGGCA CCTCGCCCTC GGCCCAGGCG
CTCACGCTGG TCGCGCCACT CGGCTTTGAC GTGACCACCG TGGCCGTGGT GGAGCGCCTG
GACCCCGCGC GCACCATCGG CATCGACATG CTGATCGACG ACGCGGCCAC CCGCCGGCGC
GTGCTGGCGA CCAACCCCGC CACGCGCGAA GACATGCGCG ACGCCGCGCA CGCGCTGTTC
GCGCGCGACG GCAAGCCAGT GAGCGTGATC CGCGACAGCG GCGGCTTCGT CACACAGCGC
GTCGTGGCCA GCATCGTCAA CATCGCCGCG GACATCTGCC AGCAGCGCAT CTGCAGCCCC
AGGGACCTGG AGACCGCCGT GACCCTGGGC CTGGGCTACC CGCTGGGCCC GCTGGCCATG
GGCGACCGCT GGGGCCCCAC CAACATCCTG GAAGTGCTCT TCAACATGCA GACCGTGTAC
GGCGACCCGC GCTACCGCCC CAGCCCCTGG CTGCGCCGGC GCGGCGCCAT CGGCCTGAGC
CTGACGCACG AAGAGCCCTG A
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| Protein sequence | MQTVFTSIGI VGTGAMGRGI AQIAAQAGST VYLYDTHGGA ADAARTHIHQ QWQRLVDKGR
LDESLLPALE QRLVPVTSLH DFAACELVVE AIVERLDAKQ ELLKQLEAIV SPEAVLASNT
SSLSITAVAA PLQRPQRMAG FHFFNPVPLM KVVEVVAGLR TDPHVCTRLA GYARAMGHTP
VMAQDTPGFI VNHAGRGYGT EALRIVSEGV ADFATVDRIL RDQVGFKLGP FELLDLTALD
VSHPVMESIY RQYYDEPRFR PSVITAQRLS GGLLGRKSGE GFYRYVDGAP ELPAEPPVPE
VSGLPPVWVS TRAARRAELY QLLKDLGATI ETGTSPSAQA LTLVAPLGFD VTTVAVVERL
DPARTIGIDM LIDDAATRRR VLATNPATRE DMRDAAHALF ARDGKPVSVI RDSGGFVTQR
VVASIVNIAA DICQQRICSP RDLETAVTLG LGYPLGPLAM GDRWGPTNIL EVLFNMQTVY
GDPRYRPSPW LRRRGAIGLS LTHEEP
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