Gene Ajs_1780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1780 
Symbol 
ID4673259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1847449 
End bp1848216 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content70% 
IMG OID639838868 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_986044 
Protein GI121594148 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.540838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCG AACTGCAAAG CACCAGCCAG GGCCAGACCC TGGTCCTGAC CCTTCGCCAC 
CCCGAACTGC GCAATGCCCT GGAGCCGGCC ATCTGCGCGG CGGGCATCGA AGCCCTGAAC
GTGGCGGAGC GCAATCCCGA TGTGCGCTGC GTGGTCATCA CGGGCGCGGA CGGCCTGTTC
AGCGCCGGCA GCAGTCCCCA ACGGCTACAG GCGTTGCGGC ATCAGAGCGC GCCAGCGCAG
GTGCACGGCC TGGATCTGCT GCACCACTGG ATCGAGGCGA TACGCACCCA TCCCAAGCCC
GTGATCGCCG CCGTGGAGGG TGAAGCCAAG GGCGCGGGGT TTTCACTCGC GCTGGCATGC
GACCTGATGG TGGCCGCGCG CAACGCGGTG TTTGCCATGA ACCATGTCCA CGCGGGCCTG
TCGCCCGATG GCGGTGCCAG CTGGAGCCTG GCGCAAATGC TGCCCCGCGC GCTGGCGCAT
GAGATCCTGA TGTGCGGCGA CCGCATCGAC GCCGCACGAC TGCAGTCCCT GGGCATGGTC
AACCGGCTGG CCGATCCCGG CCGCGCCCTG CATGAGGCGC TGGCGCTGGC CCAGCGCCTG
AACGATGGCC CGCCCCATGC GCTGGCGAGC ATCAAGGAAC TGGTGAGCGA GGCGCGGCAC
CACAGCTTCA CCGAACAGCT CGCGCTGGAG CGCAGCCACT TCGTGCGCAA CCTCCAGCAT
GCCCCGGCGG GCGAAACCCG GGCGGCGTCT GCCGACCCAC GCGCTTAA
 
Protein sequence
MPAELQSTSQ GQTLVLTLRH PELRNALEPA ICAAGIEALN VAERNPDVRC VVITGADGLF 
SAGSSPQRLQ ALRHQSAPAQ VHGLDLLHHW IEAIRTHPKP VIAAVEGEAK GAGFSLALAC
DLMVAARNAV FAMNHVHAGL SPDGGASWSL AQMLPRALAH EILMCGDRID AARLQSLGMV
NRLADPGRAL HEALALAQRL NDGPPHALAS IKELVSEARH HSFTEQLALE RSHFVRNLQH
APAGETRAAS ADPRA