Gene Ajs_1776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1776 
Symbol 
ID4672367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1842963 
End bp1843775 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content65% 
IMG OID639838864 
ProductIclR family transcriptional regulator 
Protein accessionYP_986040 
Protein GI121594144 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAC ACTCGCCGGA CGCGCCCGCC AAACCCAGTG TCCAGGTGCT GGAGCGCATG 
TTCCAGTTGA TTGACGTACT CGCTTCGCGC GAGGAAGCCA TCTCGCTGAA GGAGATCAGC
GAGAAGACGG GCCTGCATCC GTCCACCACC CACCGCATCC TCAATGACCT GACCATCGGC
CGTTTCGTGG ACCGTCCTGA GTCGGGCAGC TACCGCCTGG GCATGCGCCT ATTGGAACTG
GGCAATCTGG TGAAGGGGCG CCTGAGCGTG CGCGACGCCG CCATGGCACC CATGCGGCAA
TTGCACAAGC AGATCCAGCA GCCGGTAAAC CTCAGCGTGC GCCAGGGGGA CGAGATCGTG
TACGTGGAAC GCGCCTACAG CGAGCGTTCG GGCATGCAGG TGGTGCGCGC CATTGGCGGC
CACGCCCCGC TGCACCTCAC CTCTACGGGC AAGCTCTTCC TTGCAGCCGA CGATCCGCAG
CGCGTGCGCG CGTACGCCAC GCGTACCGGC CTGCCAGGCC ACACGCGCAA CAGCATCACC
CAGTTGCCCA TCCTGGAACG TGAACTGGGC AAGGCGCGCC AATACGGCAT TGCGCGGGAC
AACGAGGAGT TGGAACTCGG GGTGCGCTGC ATCGCGGCGG GGGTCTTTGA CGACCAGGGC
CAGCTCGTGG CAGGCCTATC AATTTCAGCG CCCGCCGATC GACTAGATGA CGGATGGCTG
CCCAAGCTCC AGTCCACCGC CGATGAAATT TCCCAGGCGC TGGGTTATAC GGCTGGGCAG
CGCACGGCGC TGGACGGCCC GCTCAAGACC TGA
 
Protein sequence
MKKHSPDAPA KPSVQVLERM FQLIDVLASR EEAISLKEIS EKTGLHPSTT HRILNDLTIG 
RFVDRPESGS YRLGMRLLEL GNLVKGRLSV RDAAMAPMRQ LHKQIQQPVN LSVRQGDEIV
YVERAYSERS GMQVVRAIGG HAPLHLTSTG KLFLAADDPQ RVRAYATRTG LPGHTRNSIT
QLPILERELG KARQYGIARD NEELELGVRC IAAGVFDDQG QLVAGLSISA PADRLDDGWL
PKLQSTADEI SQALGYTAGQ RTALDGPLKT