| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1773 |
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| Symbol | |
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| ID | 4672200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1838447 |
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| End bp | 1840120 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639838861 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_986037 |
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| Protein GI | 121594141 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0221893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCAGA ACCCCGCCGC CAAATACCGT CCCTTTGCCC CCGTGCGCTT GACGGACCGC
ACCTGGCCCG ACGCGGTGAT CGACCGCGCG CCCATCTGGT GCAGTGTGGA CCTGCGCGAC
GGCAACCAGG CGTTGATCGA GCCCATGGAC ATCGCGCGCA AGATGCGCAT GTTCGAGCAA
CTGGTGAAGA TCGGATTCAA GGAGATCGAG GTAGGCTTCC CGTCGGCCTC CCAGGTCGAG
TTCGACTTCG TGCGCAAGCT CATCGAGGAA GACCGCATTC CTGACGACGT GACCATTCAG
GTGCTGACCC AGGCGCGCGA CCATCTGATC CGTCGGACGT TTGAGGCTTT GGAAGGCGCG
CCCCGCGCCA TCGTCCACCT CTATAACGCC ACCGCGCCTG TGATGCGCCG CGTGGTGCTG
GACATGAGCG AGGAGGAAAT CGTGGAACTG GCGCGTGGCA ACGCGCAGAT GTTCAAGGAC
ATCGCTGCCC AGTACCCCCT TACCGACTGG ACGTTCCAGT ATTCGCCTGA GATGTACTCG
GACACCGAAC TGGAGTTTTC CAAGCGTGTG ATCGATGCGG TGACCGACGT GTGGCAGCCG
ACACCCCAGA AGAAGTGCAT CATCAATCTG CCGACCACGG TGGAGCACTC CACGCCGAAC
ATCTTCGCTG ACATGGTCGA GTGGACGCAC CGCCACATCC AGCGCCGCGA CTGCGTGGTG
CTGTCGGTGC ACCCGCACAA CGACCGCGGC ACCGGCACTG CAACGGCAGA GCTGGCCTTG
ATGGCGGGCG CTGACCGCCT GGAGGGCTGC CTCTTCGGCA ACGGCGAACG TACGGGTAAC
CTGGACGTGG TGAACGTGGC CCTCAACATG TACACGCAAG GCGTGCATCC GGGGCTGGAC
TTTTCGGACA TCGACGGCAT CCGCAGCACC GTGGAGTATT GCAACCAGTT ACCCGTGCAC
CCGCGCCATC CGTACGTGGG CGATCTGGTC TATACCTCGT TCTCCGGTTC GCATCAGGAC
GCCATCAAGA AAGCATTTGC CGCCCGGCGC GTGGGCGACA TCTGGGAGAT GCCCTACCTG
CCGATCGATC CCAAGGATTT GGGGCGCAGT TATGAAGCCA TCATTCGCGT CAACAGCCAG
TCCGGCAAGG GCGGCATCGC GTATCTGTTG GAGAGTGAAT ACGGCGTGCA ACTGCCGCGG
CGCTTGCAGA TCGAGTTCAG CCAGGCAGTG CAGCGCGAAA TGGACGCCAG CGGCAAGGAG
CTCACGGCCG CCGATCTGTG GAGTTTGTTC GAGCGCGAAT ACCGTCTGGA CGAGGCAGCA
ACGCCGGTAT ACCGTATGGA AGGCGAAAAC GGCACGGTTG CATTGCGCGG ACAACTGCCC
TGGCAAGGCC AGACGCTGCA GATTGAAGGC GAAGGCACAG GCCCGATCGA CGCATTCGTG
CAGGCCGTGG CCGCTGCGCT GGACTGCGAT GTGCGCGTGC TGGACTACAA CGAACATGCC
ATCAGCGAGG GCGCCCACGC CAAGGCCGTG GCCTATGTCG AGATGCGCAT CGATGATCGC
CACGCCGTAT ATGGGGTGGG CATGGATGCC AATATCGTGT CAGCCTCGAT CCGTGCCATT
CTTTCGGGGC TGCAGCGTGC TCCGCAAATA CAAGCCCAGG TGATGGTTGC CTGA
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| Protein sequence | MLQNPAAKYR PFAPVRLTDR TWPDAVIDRA PIWCSVDLRD GNQALIEPMD IARKMRMFEQ
LVKIGFKEIE VGFPSASQVE FDFVRKLIEE DRIPDDVTIQ VLTQARDHLI RRTFEALEGA
PRAIVHLYNA TAPVMRRVVL DMSEEEIVEL ARGNAQMFKD IAAQYPLTDW TFQYSPEMYS
DTELEFSKRV IDAVTDVWQP TPQKKCIINL PTTVEHSTPN IFADMVEWTH RHIQRRDCVV
LSVHPHNDRG TGTATAELAL MAGADRLEGC LFGNGERTGN LDVVNVALNM YTQGVHPGLD
FSDIDGIRST VEYCNQLPVH PRHPYVGDLV YTSFSGSHQD AIKKAFAARR VGDIWEMPYL
PIDPKDLGRS YEAIIRVNSQ SGKGGIAYLL ESEYGVQLPR RLQIEFSQAV QREMDASGKE
LTAADLWSLF EREYRLDEAA TPVYRMEGEN GTVALRGQLP WQGQTLQIEG EGTGPIDAFV
QAVAAALDCD VRVLDYNEHA ISEGAHAKAV AYVEMRIDDR HAVYGVGMDA NIVSASIRAI
LSGLQRAPQI QAQVMVA
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