| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1743 |
|---|
| Symbol | |
|---|
| ID | 4670725 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 1808611 |
|---|
| End bp | 1809390 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639838831 |
|---|
| Product | hydroxyacylglutathione hydrolase |
|---|
| Protein accession | YP_986007 |
|---|
| Protein GI | 121594111 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0994564 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAACT TGCTGCCATT GCCCGCCTTC GCCGACAACT ACATCTGGAT GATGTACGAC
GCGCAGCGTG CGGTCGTTGT GGATCCCGGC GATGCAGAAC CCGTGTTGCA GGCGCTGCGC
AGCATGGGGC TGCCATTGGA AGCGATTCTA GTCACGCACC ACCATGGCGA CCACGTGGGC
GGGGTGAACG CCCTGCGCGA AGCCACGGGC GCAACCGTGT ATGGCCCTGC CACGGAGCCC
ATGCCCGAGC CCCTCATCCG CCTGTCGGGC GGCGACACTC TTCAGGCGCT GGGCCTCACG
TTTTCCGTGC TGGACGTGCC AGGGCATACG GCGGGGCATA TCGCCTACTA CTGTGCGAAC
ATGGAAGGCG AGCCCCTGCT GTTGTGCGGG GACACGCTGT TCTCAGGTGG ATGCGGGCGC
TTGTTCGAAG GCACGCCCAC GCAAATGCAG GCCTCGCTGG ATACGTTGGC TGCATTGCCC
GGCAACACCC GCGTATGCTG CGCCCATGAA TACACGCTGT CCAACCTGAA GTTCGCCCGC
GCGGTGGAAC CCCGTAACGC TGCGCTACTC CAGTACATCA CCGAATGCGA GTCCCGGCGC
CGCGCGGATC AGCCCACACT GCCGTCGCGC ATTGCCATCG AGCGCGACAT CAACCCTTTT
CTGCGCACGC GCGTTGCTAC GGTAGCCCAA GCCGCCCACG GCTTCGACGC CCTCATAGAC
CCGCGCGAAC CCGCAGCCGT ACTGGCCGCG CTGCGCCAAT GGAAAAACGA ATTTCGATGA
|
|---|
| Protein sequence | MKNLLPLPAF ADNYIWMMYD AQRAVVVDPG DAEPVLQALR SMGLPLEAIL VTHHHGDHVG
GVNALREATG ATVYGPATEP MPEPLIRLSG GDTLQALGLT FSVLDVPGHT AGHIAYYCAN
MEGEPLLLCG DTLFSGGCGR LFEGTPTQMQ ASLDTLAALP GNTRVCCAHE YTLSNLKFAR
AVEPRNAALL QYITECESRR RADQPTLPSR IAIERDINPF LRTRVATVAQ AAHGFDALID
PREPAAVLAA LRQWKNEFR
|
|---|
| |