| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1742 |
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| Symbol | |
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| ID | 4670785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1807100 |
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| End bp | 1808614 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639838830 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_986006 |
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| Protein GI | 121594110 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.785643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0879149 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACTTC TGCACATCCT GGGGCTGGCA AGCCTGCTGT GGTTGACCGG TTGCGCGACC
ACTGCCCCTA CGGACAACGC CGCATCCACC ACCGACCCCA CTACTGCCAG CCATACGCCG
CTGTATCCGT CGGGACCATT GCAGCCCATC ACGGCGAGCG CCGCCAGCGG CCACACAGTG
GCTGGCGTCA GCGCGCCAGC CGATCTGTGG GACCGCATCC GGCGCGGCTT TTCCATGCCC
AACCTGGACA CCGATCTGGT ACGCGACCGG GAACAGTGGT ATGCCACGCG CCCCGACTAC
ATGCAGCGCA TGACCGAGCG CTCCAGCAAG TACCTGTTCC ATATCGTCGA AGAGCTGGAA
CGCCGGGGCA TGCCCACAGA ACTGGCGCTG CTGCCCTACA TCGAGAGCGC CTTCAACCCC
CAGGCAGTGT CCAGCGCCAA GGCCGCGGGC ATGTGGCAGT TCATGCCGGC CACGGGAACC
TACTTCGACT TGAAGCAGAA CGCCTTCCGC GACGACCGGC GCGATGTGCT GGCGTCCACG
CGCGCGGCAC TGGACTACCT GCAGAAGCTC TACGGCATGT TCGGCGACTG GCATCTGGCC
CTGGCCGCCT ACAACTGGGG GGAAGGCAGC GTGGCCCGCG CGATCGCGCG CAACGAGAAA
CAGGGTCTGG GCACGCGCTA CACCGAGTTG ACGATGCCCG CCGAAACCCG CATGTACGTG
CCCAAGCTGC AGGCCGTGAA GAACATCGTG GCCAATCCCG ACAAGTTCAG CACCGAGCTG
CCGCTGATCG AGAACCACCC GTACTTTCAG AGCGTGGAGA TCACGCGCGA CATGGACGTC
ACCCTGGTAG CCAGTCTCGC CGGCGTACGC ATCGAGGATT TCCGCGCCCT GAACCCGTCG
CTGCACAAGC CCGTGATCCT TGCGGCGGGC ATGCCGCAGA TCCTGCTGCC CTGGGACAAC
GCCCAGGTGT TCCGCAAGAA TCTGGAGGCC TACACCGAAG GCCAATACGC CAGTTGGACG
GTATGGACGG TACCCAACAC GATGAGCGTC TCCACCGCGG CGCAACGCAC GGGCATGAGC
GAAAACGATT TGCGTCAGGT GAATGGCATT CCACCACGCA TGATGATCAA GGCCGGCTCG
GCCCTCATGG TGCCCCGCGC AGCCACCATG CGCGCAGACG TCCCGGGTCA TCTGGCCGAC
AACGGCCAAG TCAGCTTCAC GCCCGAAATC GTGACGCGGC GCACCACGGT GCGCGCGGGC
AAGCGCGACA CCGTAGCCAG CATCGCGCGG CGCTACAAGG TCAGCACCGC AGACGTTGCC
GACTGGAACG ACGTGAAGAC CTCCAGCAAG TTCAAGCCCG GAGAACAGGT CGTGATGTAC
CTGCCCGTGC GGCTTGCCGC GACCTCGCTG GCGCGCACCA GCGCGAAACA ACCCATCAGC
CGGGCGACAG TCCGCTCGGC AAAGGCCGGT GCGCCCGCAC GCAAGGGCGG CACACCGTCG
AAACGCAAAC GGTAA
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| Protein sequence | MRLLHILGLA SLLWLTGCAT TAPTDNAAST TDPTTASHTP LYPSGPLQPI TASAASGHTV
AGVSAPADLW DRIRRGFSMP NLDTDLVRDR EQWYATRPDY MQRMTERSSK YLFHIVEELE
RRGMPTELAL LPYIESAFNP QAVSSAKAAG MWQFMPATGT YFDLKQNAFR DDRRDVLAST
RAALDYLQKL YGMFGDWHLA LAAYNWGEGS VARAIARNEK QGLGTRYTEL TMPAETRMYV
PKLQAVKNIV ANPDKFSTEL PLIENHPYFQ SVEITRDMDV TLVASLAGVR IEDFRALNPS
LHKPVILAAG MPQILLPWDN AQVFRKNLEA YTEGQYASWT VWTVPNTMSV STAAQRTGMS
ENDLRQVNGI PPRMMIKAGS ALMVPRAATM RADVPGHLAD NGQVSFTPEI VTRRTTVRAG
KRDTVASIAR RYKVSTADVA DWNDVKTSSK FKPGEQVVMY LPVRLAATSL ARTSAKQPIS
RATVRSAKAG APARKGGTPS KRKR
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