| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1725 |
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| Symbol | |
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| ID | 4672012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1794165 |
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| End bp | 1794950 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639838814 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_985991 |
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| Protein GI | 121594095 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.039074 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGCGCA TGTCTTTGCT CCTGCGCCCG CGGGCGCTGG GCGCGGCGGC GCTGGCCGCC
GCTGCCTGCT GGTCGACCCC CAGCTATGCA TTGTTCGAGG ACAGCGAGGC GCGCCGTGCC
ATCCTTGAGA TGCGCCAGCG TGTCGATGCA TTGACACAGG CCAGCCAGCG TGCGGGTGAA
CGGTCCGGTG ATGAGGTCTC GCAACTACGG CGCAGCCTGC TCGACCTACA GATGCAAATC
GAGGCATTGC GCACTGAACA GGCGACACTG CGTGGTCAGA ACGAGCAGCT ATTGCGCGAT
GTCGCAGAGC TGCAGCGCCG TCAGAAGGAC ATGGCACAGG GTGTCGATGA GCGGTTGCGC
CAGTTTGAGC CCGCGACGGT GACGCTGGAC GGGCGCGAAT TCCGGGCTGA TCCTGCAGAG
AAGCGTGATT TCGAGGCGGC CTTGGCGCTC TTCCGTGCAG GTAAGTTTGG TGAAGCGTCC
AACGCTTTCA GCGGCTTCGT GCGCCAGTAT CCACAGTCCG GTTATGTACC GTCTGCCCGT
TTTTGGCTGG GCAATGCACA GTACGCCACG CGTGATTACA AAGAGGCCAT CAACAACTTC
AAGGCTCTGT TGTCGGCGGC GCCAGACCAT GCGCGCGCTC CCGAGGCGGC CCTCTCGATT
GCCAATTGCC AGATCGAATT GAAAGATACG CGGGCTGCGC GCAAGACCCT GGAAGACTTG
CTGCGCGTTT ATCCGCAGTC GGAAGCGGCA GCCGCTGCGA AGGAACGCCT GGCGCGCCTG
AAGTGA
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| Protein sequence | MPRMSLLLRP RALGAAALAA AACWSTPSYA LFEDSEARRA ILEMRQRVDA LTQASQRAGE
RSGDEVSQLR RSLLDLQMQI EALRTEQATL RGQNEQLLRD VAELQRRQKD MAQGVDERLR
QFEPATVTLD GREFRADPAE KRDFEAALAL FRAGKFGEAS NAFSGFVRQY PQSGYVPSAR
FWLGNAQYAT RDYKEAINNF KALLSAAPDH ARAPEAALSI ANCQIELKDT RAARKTLEDL
LRVYPQSEAA AAAKERLARL K
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