| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1723 |
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| Symbol | tolB |
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| ID | 4672754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1792252 |
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| End bp | 1793583 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639838812 |
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| Product | translocation protein TolB |
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| Protein accession | YP_985989 |
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| Protein GI | 121594093 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0502645 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCCAA TGACTATTGA CCGCATCCCC AATACCCCTT CCTTCCGCAC GGCTCTGCCG
CACCTTTCGC GGCGCCACGC CATTGCAGCC TTGGCTGCCA GTTCCCCCCT TTCAGCGCTT
GCGCAGTTCC GTGTGGAAAT CACGGGCGTA GGCCTGACGC AACTACCCAT TGCGATTGCA
CCGTTTCGTG GCGAACCGCA GTCGCCGCAG AAAATATCCG CCATCGTCCA GGCTGACCTG
GAGCGCAGCG GGCGCTTTTT GGGCGTGGAC GCGTCGGGTG TCGCGCTGGA TGAATCATCC
CGTCCCGATC TGTCCCTGTG GCGTCAGCGC AAGGCCGACG CACTCACCTC CGGCAGCATC
ACGCGCTTGG CCGACGGCCG TTTCGACGTG CGATTCCGCT TGTGGGACGT GGTCAAGGCG
CAAGACCTGG GCGGGCAGAG CTTCGTGGTC ACGCAGGCCG ACCTGCGTCT GGTGGCGCAC
CGCATTGCCG ACTTCGTCTA CGAAAAACTC ACGGGCGAGC GCGGTATCTT CTCCACGCGC
ATTGCGTATG TGACCAAAGC CGGCTCGCGC TACAGCCTTT GGGTGGCCGA TGCGGACGGC
GAGAACGCGC AGTCAGCGCT TTCCAGTCCT GAGCCGATCA TTTCTCCCGC ATGGGCGCCC
ACCGGGACCC AGCTGGCTTA CGTATCGTTC GAGTCGCGTA AGCCGGTGGT GTACGTGCAT
GACGTGGCCA CAGGCCGCCG CCGTTTGATC GCCAATTTCC GTGGCTCCAA CAGTGCCCCT
GCTTGGTCGC CCGATGGCCG TACCTTGGCC GTGACCCTCA GCCGCGACGG GGGCTCACAG
CTCTACACCA TCGACGCCAA CGGCGGTGAG CCGCGCCGCC TGATGCAAAG CAGCGGCATC
GACACGGAGC CCGTGTTCTC CAGCGACGGC CGCAGCATCT ACTTCGTCAG CGACCGTGGA
GGTTCGCCCC AGGTGTACCG CGTGGCAGCC AGCGGGGGAG GCGCGGAGCG CGTGACCTTC
AATGGGTCCT ACAACATTTC ACCCAGCATC AGTCCCGATG GTCAGTGGTT GGCCTACATT
TCCCGCGTGG GCGGCGCCTA TAAGCTGCAC GTGATGGATT TGAAGTCGGG CAGCGTGACG
GCGGTGACCG ACACCTCCGC CGATGAGAAT CCCAGCTTTG CTCCCAATAG CCGGCTGATC
GTCTACGCCA CGCAGCAGCA GGGTCGCGAA GCCCTGATGA CCACCACGCT GGACGGAAAA
ATCAAGGCGC GTCTGGCGGG GCAGGGTGGA GATATCCGCG AGCCCGACTG GGGCCCGTTC
CAGAACAAAT AA
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| Protein sequence | MVPMTIDRIP NTPSFRTALP HLSRRHAIAA LAASSPLSAL AQFRVEITGV GLTQLPIAIA
PFRGEPQSPQ KISAIVQADL ERSGRFLGVD ASGVALDESS RPDLSLWRQR KADALTSGSI
TRLADGRFDV RFRLWDVVKA QDLGGQSFVV TQADLRLVAH RIADFVYEKL TGERGIFSTR
IAYVTKAGSR YSLWVADADG ENAQSALSSP EPIISPAWAP TGTQLAYVSF ESRKPVVYVH
DVATGRRRLI ANFRGSNSAP AWSPDGRTLA VTLSRDGGSQ LYTIDANGGE PRRLMQSSGI
DTEPVFSSDG RSIYFVSDRG GSPQVYRVAA SGGGAERVTF NGSYNISPSI SPDGQWLAYI
SRVGGAYKLH VMDLKSGSVT AVTDTSADEN PSFAPNSRLI VYATQQQGRE ALMTTTLDGK
IKARLAGQGG DIREPDWGPF QNK
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