Gene Ajs_1721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1721 
Symbol 
ID4672883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1789545 
End bp1790231 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content71% 
IMG OID639838810 
Productankyrin 
Protein accessionYP_985987 
Protein GI121594091 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0643152 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGCC TGTTGCAGCG TCGCAGCGCC CTGGCGTGGC TCGCCGTGGT TGCCGCCGGC 
ACCGTGGGGC CGGCACATGC CGGCGCGTAC GACGATTTCC TGCGTGCCAT CGCGCGCGAC
GATGCCGCCA CGGTGGCTTC GCTGCTGCGC CGCGGGTTTG ACCCCAACGC GCGCGATCCC
AAGGGGCAGC CCGCGCTGAT CTTGGCCCTG CGCGAGGAAG CGCGGCAGGT GGCCGAGGTG
CTGATCGCCG CCAAGGGGCT GAAGGTGGAG GAGCGCAATG CCAAGGACGA AAGCGCGCTG
ATGATGGCCG CGTTGCGCGG CAATCTGCCC GCTGCGCGCG GCCTGATCGC GCGCGAGGCG
GACGTCAACA AGACCGGCTG GGCGCCGCTG CACTATGCCG CCGCGAGCAC CACGGCCGAT
GCCGCCGCCA TGGTGGCGCT GTTGCTGGAG CATCACGCCT ACATCGACGC CGCATCGCCC
AACGGCACCA CGCCGCTGAT GATGGCCGTG CGCTACGGCA CGGCGGATGC GGCGCGCCTG
CTGATCAGCG AGGGGGCCGA CCCATCGCTG AAGAACCAAC TGGGCCTGTC GGCCGTGGAT
TTCGCCCTGC GCGCCGACCG GCAGGACATG GTGCAACTGG TGGCGGAGGC CGTACGCCGC
CGCCAGCCGG ACCGCGGGAA ATGGTAG
 
Protein sequence
MKSLLQRRSA LAWLAVVAAG TVGPAHAGAY DDFLRAIARD DAATVASLLR RGFDPNARDP 
KGQPALILAL REEARQVAEV LIAAKGLKVE ERNAKDESAL MMAALRGNLP AARGLIAREA
DVNKTGWAPL HYAAASTTAD AAAMVALLLE HHAYIDAASP NGTTPLMMAV RYGTADAARL
LISEGADPSL KNQLGLSAVD FALRADRQDM VQLVAEAVRR RQPDRGKW