Gene Ajs_1712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1712 
Symbol 
ID4673297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1781839 
End bp1782714 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content71% 
IMG OID639838801 
Producthydratase/decarboxylase 
Protein accessionYP_985978 
Protein GI121594082 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.376649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.38859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGA AGCAAACCCT CATCGCCCTG GGCGCGGGGG TCGCCTTGGC GACCGGCCTG 
GGCGCCCAGG CCGAGTGCCT CAGCGACGCT GCGGTGGGGG CGATGGCCTC GCACTACGCC
GCCAAGACCC CCGCGCCCAA CTTCCCGGCA CTGTCAGACG CCGACGGCGC CTGCACCCGC
GCCAAGTTCA ATGCGCTGCT GGGCGCCCGC CTGGGCAAGG TGGTGGGCTA CAAGGCCGGC
CTCACCAACC CCGCGGTGCA AAAGCGCTTC AACACCGACA AGCCGGTGTG GGGCAAGCTG
TACGAGGGCA TGCTGCGCCC CGGCGGCAGC ACCGTGCCCG CCGCGTTTGG GGCGCGCCCG
CTGTACGAGG CCGACCTGCT GGTACGCGTG AAGGATGCGG CCATCAACCA CGCGCGTACG
CCGGAGGAGG TGCTGCAGCA CATCGACCAG GTGATCCCCT TCATCGAGCT GCCCGACCTG
GTGGTGCAGG CGCCGCCCCA GCTCAACGGC GCCGGCGTGG GCGCGATCAA CGTGGGCGCG
CGCCTGGGCA TCGCCGGGCA GCCTATCGCC GTGCCGGCGA CGCGCGGCGA GCGCTATGCG
CTGCTGGACG CGCTGGAGCG CATGACCGTG CAGCTCACGG ACCATTCCGG CGCGCTGCTC
GCCAGCGGCA AGGGCAGCGA TATCCTCGGG CATCCGCTCA ACGCCGTGGT CTGGCTGGCC
CAGGCGCTGC AGCAGGAGGA GATCACGCTG CAGCCCGGCG ACCTGGTGAG CCTGGGGTCG
TTTTCTCCGC TGCTGCCCCC GCGCGCCGGC CTGAGCGTCA CGGCAAGCTA TCTGGGCCTG
CCCGGCGCGC AGCCGGTGCA GGTGCACTTC CAATAA
 
Protein sequence
MTMKQTLIAL GAGVALATGL GAQAECLSDA AVGAMASHYA AKTPAPNFPA LSDADGACTR 
AKFNALLGAR LGKVVGYKAG LTNPAVQKRF NTDKPVWGKL YEGMLRPGGS TVPAAFGARP
LYEADLLVRV KDAAINHART PEEVLQHIDQ VIPFIELPDL VVQAPPQLNG AGVGAINVGA
RLGIAGQPIA VPATRGERYA LLDALERMTV QLTDHSGALL ASGKGSDILG HPLNAVVWLA
QALQQEEITL QPGDLVSLGS FSPLLPPRAG LSVTASYLGL PGAQPVQVHF Q