Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1712 |
Symbol | |
ID | 4673297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 1781839 |
End bp | 1782714 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639838801 |
Product | hydratase/decarboxylase |
Protein accession | YP_985978 |
Protein GI | 121594082 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.376649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.38859 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATGA AGCAAACCCT CATCGCCCTG GGCGCGGGGG TCGCCTTGGC GACCGGCCTG GGCGCCCAGG CCGAGTGCCT CAGCGACGCT GCGGTGGGGG CGATGGCCTC GCACTACGCC GCCAAGACCC CCGCGCCCAA CTTCCCGGCA CTGTCAGACG CCGACGGCGC CTGCACCCGC GCCAAGTTCA ATGCGCTGCT GGGCGCCCGC CTGGGCAAGG TGGTGGGCTA CAAGGCCGGC CTCACCAACC CCGCGGTGCA AAAGCGCTTC AACACCGACA AGCCGGTGTG GGGCAAGCTG TACGAGGGCA TGCTGCGCCC CGGCGGCAGC ACCGTGCCCG CCGCGTTTGG GGCGCGCCCG CTGTACGAGG CCGACCTGCT GGTACGCGTG AAGGATGCGG CCATCAACCA CGCGCGTACG CCGGAGGAGG TGCTGCAGCA CATCGACCAG GTGATCCCCT TCATCGAGCT GCCCGACCTG GTGGTGCAGG CGCCGCCCCA GCTCAACGGC GCCGGCGTGG GCGCGATCAA CGTGGGCGCG CGCCTGGGCA TCGCCGGGCA GCCTATCGCC GTGCCGGCGA CGCGCGGCGA GCGCTATGCG CTGCTGGACG CGCTGGAGCG CATGACCGTG CAGCTCACGG ACCATTCCGG CGCGCTGCTC GCCAGCGGCA AGGGCAGCGA TATCCTCGGG CATCCGCTCA ACGCCGTGGT CTGGCTGGCC CAGGCGCTGC AGCAGGAGGA GATCACGCTG CAGCCCGGCG ACCTGGTGAG CCTGGGGTCG TTTTCTCCGC TGCTGCCCCC GCGCGCCGGC CTGAGCGTCA CGGCAAGCTA TCTGGGCCTG CCCGGCGCGC AGCCGGTGCA GGTGCACTTC CAATAA
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Protein sequence | MTMKQTLIAL GAGVALATGL GAQAECLSDA AVGAMASHYA AKTPAPNFPA LSDADGACTR AKFNALLGAR LGKVVGYKAG LTNPAVQKRF NTDKPVWGKL YEGMLRPGGS TVPAAFGARP LYEADLLVRV KDAAINHART PEEVLQHIDQ VIPFIELPDL VVQAPPQLNG AGVGAINVGA RLGIAGQPIA VPATRGERYA LLDALERMTV QLTDHSGALL ASGKGSDILG HPLNAVVWLA QALQQEEITL QPGDLVSLGS FSPLLPPRAG LSVTASYLGL PGAQPVQVHF Q
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