| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1707 |
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| Symbol | |
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| ID | 4674430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1774586 |
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| End bp | 1776982 |
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| Gene Length | 2397 bp |
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| Protein Length | 798 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639838796 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_985973 |
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| Protein GI | 121594077 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.700604 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGA TCGTTCGGCA GTTGGCCGCA GAAATCAAAG TCACCGAATC CCAGGTCCGC
GCAGCGGTGG AGCTGCTCGA TGGCGGGGCC ACCGTGCCCT TCATCGCACG CTACCGCAAG
GAGGTGACCG GCGGCCTGGA CGATGTGCAA CTGCGCGAGC TCGAAGCGCG CCTGGCCTAC
TTGCGCGAAC TGGAAGACCG CCGCGTTGCG GTGCTGAAAA GCATCGACGA GCAGGGCAAG
CTGACCGACG CATTGCGCGC TGCCATTGCT GCTGCTCCAA CGAAGCAGGA GCTGGAAGAC
ATCTACCTGC CGTTCAAGCA AAAGCGCCGC ACCAAGGGCC AGATTGCCAA GGAGTTCGGC
ATCGAGCCGC TGGCCGACAA GCTGCTGGCC GATCCCACGC TGGACCCGCA CGCCGAGGCC
CAGGCCTTCT GCCAGCCCGC CACCACGCTC GATGACGGCA AGCCGGGGCC CGATTTTTCG
ACCACCTTCG CCGTGCTCGA CGGCGTGCGC GACATCCTGT CCGAGCGCTG GGCCGAGGAC
GCCGTGCTGG TGCAGTCGCT GCGCGAATGG CTGTGGGCCG AGGGGCTCTT GCGCAGTAAG
AAGGTGGAGG GCAAGAACGA GAACGACCCC GAGGTGGCCA AGTTCCGCGA CTACTTTGAG
TACGACGAAC CGATTGGCCG CGTGCCCTCG CACCGCGCGC TGGCGGTGTT CCGCGGCCGC
GCGCTGGAGA TTCTGGAGGC CAAGCTGGTG CTGCCTGAGC CGCAGGTGAA TTCCACGTTC
AAGCCCGAGC CGGGCCAGCC CAGCCTCGCC GAGGGCAAGA TCGCCCTGCA CCTGGGCTGG
AGCCACCAGG GCCGCAAGAG CGACGACCTG CTGCGCAAGT GCGTGGCCTG GACCTGGCGC
GTGAAGCTCA GCCTGTCCAC CGAGCGCGAC CTGTTCTCGC GCCTGCGCGA AGAGGCCGAG
AAAGTGGCCA TCAAGGTGTT TGCCGACAAC CTGCGCGACC TGCTGCTGGC CGCGCCCGCC
GGCCCGCGCG CCGTGATGGG GCTGGACCCC GGCATCCGCA CCGGCGTGAA GGTGGCCGTG
GTGGACCGCA CCGGCAAGCT GGTGGAGACC GCCACCGTCT ACCCGCACGA GCCGCGCCGC
GACTGGGACG GCAGCCTGGC CACGCTGGGC CGCCTGTGCA TGAAGCATGG CGTGCAGCTC
ATCGCCATCG GCAACGGCAC TGCCAGCCGC GAAACCGACA AGCTGGCGGC CGAGTTGATC
AAATTAATGC AAAAACAGGC GGTAGACCAG GCGGGGCAAG CGCTACCAGC TATTGAAAAG
ATAGTGGTGA GCGAGGCTGG CGCCTCGGTG TATTCCGCCA GCGAGTACGC CAGCCAGGAA
ATGCCCGACG TGGACGTGAG CCTGCGCGGC GCCGCCAGCA TTGCGCGCCG CCTGCAGGAC
CCGCTGGCCG AGCTGGTGAA GATCGAGCCC AAGAGCATTG GCGTGGGCCA GTACCAGCAC
GACGTGAACC AGAGCGAGCT GGCGCGCACG CTGGACGCCG TGGTCGAGGA CTGCGTGAAC
TCCGTCGGCG TGGACCTGAA CACCGCCAGC GCGCCGCTGC TGACGCGCGT GTCGGGCCTG
TCGGGCAGCG TGGCCAAGGC CGTGGTGCGC TGGCGCGAGC AGCACGGCGC CTTCAGGAAC
CGCAAGCAGC TCATGGAAGT CAGCGGCCTG GGCGCCAAGA CTTTCGAGCA GGCGGCGGGC
TTCTTGCGCA TCCGCGATGG CGACAACCCG CTGGACATGA CCGGCGTGCA CCCTGAGACC
TACCCCGTGG TCGAGCAGAT CATGGCAAAG ACCGGCAAGC CGGTGGCCGA GCTCATGGGC
CGCGCCGAGA TGCTCAAGAC GCTCAAGCCC GAGCTGTTCG CCAACGAGAA GTTCGGCGTG
ATCACCGTGC GCGACATCCT GGGCGAACTG GAAAAGCCCG GCCGCGACCC GCGCCCGGAC
TTCAAGGTGG CGCGCTTCAA CGAGGGCGTG GAAGACATTG CCGACCTGCG CGAGGGCATG
GTGCTGGAGG GCACGGTGAG CAACGTGGCC CAGTTCGGCG CCTTCGTGGA CCTGGGCGTG
CACCAGGATG GGCTGGTGCA CGTGAGCCAG CTCAGCCACA AGTTCGTTCA GGATGCGCGC
GAGGTGGTCA AGACCGGCGA CATCGTCAAA GTGAAGGTGC TGGAGGTGGA TGCGGCGCGC
AAGCGCATCA GCCTCAGCAT GAAGCTGGAC GCCGCACCCG CGCGCCGCGA CGGCCCGCGC
GACAACCGCT TCGAAGGCGC GGGCCGCGGC TACGCCGCGC CGCGCCGCGC GGCCGAGCCG
GCGCAGCCCT CGGCCATGGC CTCGGCCTTC GCCAAGCTGC AGCAGGGCAA GCGCTGA
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| Protein sequence | MQQIVRQLAA EIKVTESQVR AAVELLDGGA TVPFIARYRK EVTGGLDDVQ LRELEARLAY
LRELEDRRVA VLKSIDEQGK LTDALRAAIA AAPTKQELED IYLPFKQKRR TKGQIAKEFG
IEPLADKLLA DPTLDPHAEA QAFCQPATTL DDGKPGPDFS TTFAVLDGVR DILSERWAED
AVLVQSLREW LWAEGLLRSK KVEGKNENDP EVAKFRDYFE YDEPIGRVPS HRALAVFRGR
ALEILEAKLV LPEPQVNSTF KPEPGQPSLA EGKIALHLGW SHQGRKSDDL LRKCVAWTWR
VKLSLSTERD LFSRLREEAE KVAIKVFADN LRDLLLAAPA GPRAVMGLDP GIRTGVKVAV
VDRTGKLVET ATVYPHEPRR DWDGSLATLG RLCMKHGVQL IAIGNGTASR ETDKLAAELI
KLMQKQAVDQ AGQALPAIEK IVVSEAGASV YSASEYASQE MPDVDVSLRG AASIARRLQD
PLAELVKIEP KSIGVGQYQH DVNQSELART LDAVVEDCVN SVGVDLNTAS APLLTRVSGL
SGSVAKAVVR WREQHGAFRN RKQLMEVSGL GAKTFEQAAG FLRIRDGDNP LDMTGVHPET
YPVVEQIMAK TGKPVAELMG RAEMLKTLKP ELFANEKFGV ITVRDILGEL EKPGRDPRPD
FKVARFNEGV EDIADLREGM VLEGTVSNVA QFGAFVDLGV HQDGLVHVSQ LSHKFVQDAR
EVVKTGDIVK VKVLEVDAAR KRISLSMKLD AAPARRDGPR DNRFEGAGRG YAAPRRAAEP
AQPSAMASAF AKLQQGKR
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