| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1703 |
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| Symbol | |
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| ID | 4673871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1769954 |
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| End bp | 1771360 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639838792 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_985969 |
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| Protein GI | 121594073 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.824746 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCT TACCCGTGGG TGCGCCGCCC CTGGCCGACG GCCTGCCGCA GCCCGCACGC
CGCCAGGCGA TGCTGGTCAT CGTTCTCGGG CTCACGCTGG CGGTGCTCGA CAGCAGCATC
GTCAACCTGG CGCTGCCCGA CATCGCACGC CAGTTGCAGT CGGGCGCGGC GCAGAGCGTG
TGGGTGGTCA ACGCCTACCA GCTCGCCACG CTGGTCGTGC TGCTGCCGCT GGCCGCGCTG
GGCGAGCGCG TGGGCTACCG GCGCGTGTAC TTGGTGGGCA TGGCGCTGTT CGCGCTGGCG
TCGGTGGGCG CCATGCTGGC GGCCAGCATG CCCGCCTTGA TTGCCGCGCG GGCGTTGCAG
GGCCTGGGCG CCGCGGGCGT GATGGCCGTG AACGCGGCGC TGGTGCGCCT GATCTATCCG
CGCGCACAGC TGGGCCACGG CATGGCCATC AATTCGCTGG TGGTGGCCAC CGCGTCCATG
GCGGGGCCGT CGGTGGCGGC GGCCATCCTG TCGGTGGCGT CGTGGCCCTG GCTGTTTGCC
ATGAACCTGC CCTTGGGCGT GGGAGTCTGG TGGCTGGGGC GGCGCGCGCT GCCGGTCAAT
CCTCCATCCG CCAACCATGC GCCGCGCTTT TCCGCCATCG ACGTGCTACT CAACGGCGCC
ATGTTCACGT TGCTGTTCCT GGGCGGGGAG CAACTGGGCG TGCGCAGCGC GGCGCAGGGC
GGCAGCGCGG CCACGGGTGC GATCCTGCTG GCCGTGGGTG TGGCCGTGGG GGCGGTGTTC
CTGTGGCGCC AGCGCGGCCT GGCGGCGCCG CTGTTTCCGG TGGACCTGCT GCGCATTCCG
GTGTTCGCCC TGTCGATGGG CTCGTCCGTG GGGGCGTTCT GCGCGCAGAT GCTGGGCTTT
CTGTCGCTGC CCTTCCTGCT GTTGGAGGCG CAGGGCCGCA CCCACCTGGA GGCCGGGCTG
CTCATCACGG CCTGGCCCCT GGCCACCGCC GTGGTGGCGC CGCTGGCGGG CCGGTTGATT
GGCCGCTACC CGGACGGCCT GCTCGGCGGC ATTGGCATGG CGGTGTTTGC TGCCGGCCTG
GTCTCGCTGG GCCTGATGCC CGCGCAGCCC GCGGACTGGA ACGTGGCCTG GCGCATGGCG
CTGTGCGGTG CCGGCTTTGC GCTGTTCCAG TCGCCCAACA ACCACACCAT TGTCACCTCG
GCCCCGCTGC ACCGCAGCGG CGCGGCCAGC GGCATGCTGG GCACCGCGCG CCTGACGGGC
CAGACACTGG GCGCCGTGTC GCTCGCGGCC ATCTTCGCCC TGCGGCCGGG GCACGATGGA
AGCGCGGAGT CGCTGGCACT GCTGGTGGCA GGGGCGTGCG CGGTGGTGGC GGGGGTGTGC
AGCTCGCTGC GGGTGAGGCA GCGGTAA
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| Protein sequence | MSGLPVGAPP LADGLPQPAR RQAMLVIVLG LTLAVLDSSI VNLALPDIAR QLQSGAAQSV
WVVNAYQLAT LVVLLPLAAL GERVGYRRVY LVGMALFALA SVGAMLAASM PALIAARALQ
GLGAAGVMAV NAALVRLIYP RAQLGHGMAI NSLVVATASM AGPSVAAAIL SVASWPWLFA
MNLPLGVGVW WLGRRALPVN PPSANHAPRF SAIDVLLNGA MFTLLFLGGE QLGVRSAAQG
GSAATGAILL AVGVAVGAVF LWRQRGLAAP LFPVDLLRIP VFALSMGSSV GAFCAQMLGF
LSLPFLLLEA QGRTHLEAGL LITAWPLATA VVAPLAGRLI GRYPDGLLGG IGMAVFAAGL
VSLGLMPAQP ADWNVAWRMA LCGAGFALFQ SPNNHTIVTS APLHRSGAAS GMLGTARLTG
QTLGAVSLAA IFALRPGHDG SAESLALLVA GACAVVAGVC SSLRVRQR
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