Gene Ajs_1702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1702 
Symbol 
ID4673883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1768719 
End bp1769957 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content72% 
IMG OID639838791 
ProductBcr/CflA subfamily drug resistance transporter 
Protein accessionYP_985968 
Protein GI121594072 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.627963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTTT CCCCGTTCTT CCGCATGGCC CTGATCCTGG GCCTGCTCTC GGCCATCGGC 
CCATTTGCCA TCGACATGTA CCTGCCGGCG CTGCCGGCCA TCGGCGCGGC GCTGCGGGCC
GACGTGGGGG CGGTGCAGTG GAGCCTGACG GCCTTCTTCC TCGCACTGGG CGTGGGCCAG
TTGGTCTACG GCCCGGTGTC CGACATGGTC GGGCGCAGGC CGCCGCTGTT CTTCGGGCTG
GGCCTGTTCA CGCTGGCCAG CGTGGGCTGC GCGCTGGCGA CCGACGTGCA CACGCTCGTG
CTGCTGCGCT TTGTGCAGGG GCTGGGCGCG GCGGCGGGCA TGGTGATTCC GCGCGCGGTG
GTGCGCGACC TGCACACGGG CACCGAGGCG GCCCGGCTCA TGTCGCTGCT GATGCTGGTG
TTCAGCGTGT CGCCCTTGTT GGCGCCATTG GTGGGCAGCG GCGTGATCGC GCTGGCCGGC
TGGCGCGGCG TGTTCTGGGT GGTGGCGGTG GCGGCGCTGG CCGGGCTGGT GTTGGTCCAG
CGGGCGCTGC ACGAGACACG GCCCGCCGGC CAGCGGGTGC GCAGTTCCGT GGGCAGCGCG
GCCGCGGCCT ACACGACGCT GCTGCGCGAC TGGCACTACC TGGGGCTGGT GGGGATCGGC
GGCTGCTCCA TGGCGGGTTT CTTCGTTTAC CTGGCGGGCT CGCCTTTCGT GCTGATCAAC
CATTACGGGT TGTCGCCCGT GCAGTACAGC GTGGCGTTTT CGGTCAACGC GGCGGCCTTC
TTCGCCAGCG CGCAGCTCAC GGCGCGGCTG GGGCGGCGCT ACGGCATGGC GCCGGTGGTG
AAGGCGGCCG CCAGCGGCGC GTGCGCGGTC ATGCTGGCCC TGCTGGCGCA TTACCTGCTG
GGCGGCGACC GGCTGGCCGT GCTGCTGGTG CTGTACTTCG TCGCCAGCGC GCTGATGGGG
CTGGTGATCC CCACCACCTC CGTGCTGGCG CTGGAGGAGC ACGGCACCAT TGCGGGGACG
GCGTCCGCCC TCATGGGCAC GCTGCAGATG CTGATCGGCA CCCTCGCCAT GGCGGCGGTG
GGCCTGTTTG CCAGTGACGC GCCCCTGCCC ATGGTGGTGG GCATGGCCAC GGGGGCGCTG
ACGGGGGTGG CGCTGACCTG GATCACGCTG GGGCCGGCGG GCGCGCAGCG CATCGCGCAC
GGCGCCGCGA AAGACATCGC CCCGGAGCGC CGGCCATGA
 
Protein sequence
MPFSPFFRMA LILGLLSAIG PFAIDMYLPA LPAIGAALRA DVGAVQWSLT AFFLALGVGQ 
LVYGPVSDMV GRRPPLFFGL GLFTLASVGC ALATDVHTLV LLRFVQGLGA AAGMVIPRAV
VRDLHTGTEA ARLMSLLMLV FSVSPLLAPL VGSGVIALAG WRGVFWVVAV AALAGLVLVQ
RALHETRPAG QRVRSSVGSA AAAYTTLLRD WHYLGLVGIG GCSMAGFFVY LAGSPFVLIN
HYGLSPVQYS VAFSVNAAAF FASAQLTARL GRRYGMAPVV KAAASGACAV MLALLAHYLL
GGDRLAVLLV LYFVASALMG LVIPTTSVLA LEEHGTIAGT ASALMGTLQM LIGTLAMAAV
GLFASDAPLP MVVGMATGAL TGVALTWITL GPAGAQRIAH GAAKDIAPER RP