| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1693 |
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| Symbol | |
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| ID | 4673172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1760620 |
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| End bp | 1761753 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639838783 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_985960 |
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| Protein GI | 121594064 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.502178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.251064 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGA AACCCCATGG GCGCCTGCGC GCCTGGCAAG CCGCCTGCCT GCTGGCGGGC
GCCCTGAGCG GCGGCGCCGC CTCGGCCGAC ATCCTGATCG GGCAGACCAC GGCCGTCAGC
GGCCCAGTGG CGGCCAGCGT GGGCGAGACC CTCGCGGGCG TGCACCTGTA TCTGGACCAC
GTCAATGCCA AGGGTGGCGT GCATGGCGAG CGCATCAAGC TGATCACGCT GGACGACAAG
TTCGAGCCCA AGCTCGCCGG CGAGAACGCG CGCCGCCTGA TCGAAGACGA CAACGTGGCC
GCGCTGTTCA TGAGCCGCGC CACGCCGCAC ACCGAAGCCA TACTGCCGCA CCTGGCCAAG
CACGGCGTGG CGCTGGTGGC GCCCTCCACG GGTGCGATGA CCTTCCACAA GCCCGCCAAC
CCGCTGGTGT TCAACGTGCG CTCCAGCTAC CAGGCCGAGA CCGAGAAGGC CGTGGAGCAC
CTGCACACCA TCATGGTCCA GCGCATCGCC GTGGTGCACG TGGACGACAG CTTTGGCGAG
GACTGCCTGG CCGGTGCCCA GAAGGGCTTT GCCAACGTGG GCAGCAAGCC CGTGGCCGTG
ATCAAGGCCG ACCGTGCCAA GCCGGACTAC GCCACCATCG TGCCGCAGCT CATCCAGGCG
CAGGCCCAGG CGGTCATCTG GATCGGCTCC AGCGTGGCGG TGAGCGACGG CGTGAAAGCG
CTGCGCAAGG CCGGCTCGTC CATGCAGGTG GTCACGGTGT CGAACAACGC ATCCCGCGGC
TTCGTCGCCC AGCTGGGCGA CTCGGTGCGC GGCGTGATCG TCACGCAGGT GTTCCCCAAC
GTGCGCTCCA TGGGCTACGC CATCAACCGC GAGGCCGCCG CTCTGGCCAA GGCCAAGGGC
AACCTGACGC TGTCACCCTC GGTGATGGAA GGCTTCACCT CCGCCAAGGT GCTGGTGGAA
GGCCTGCGCC GCGCCGGCCC CAAGCCCACG CGCGAGAAGA TCGTCACCGC GCTGGGCGGC
ATGAGCCACT ACGACCTGGG CGGGCTGGAG CTGGGCTACG GCCCCGGCGA CCGCACGGGC
CTGAGCTACG TGGAGCTGTC CATCATCGAC GCGGACGGAC TGTTCCGCCG CTGA
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| Protein sequence | MNQKPHGRLR AWQAACLLAG ALSGGAASAD ILIGQTTAVS GPVAASVGET LAGVHLYLDH
VNAKGGVHGE RIKLITLDDK FEPKLAGENA RRLIEDDNVA ALFMSRATPH TEAILPHLAK
HGVALVAPST GAMTFHKPAN PLVFNVRSSY QAETEKAVEH LHTIMVQRIA VVHVDDSFGE
DCLAGAQKGF ANVGSKPVAV IKADRAKPDY ATIVPQLIQA QAQAVIWIGS SVAVSDGVKA
LRKAGSSMQV VTVSNNASRG FVAQLGDSVR GVIVTQVFPN VRSMGYAINR EAAALAKAKG
NLTLSPSVME GFTSAKVLVE GLRRAGPKPT REKIVTALGG MSHYDLGGLE LGYGPGDRTG
LSYVELSIID ADGLFRR
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