Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1680 |
Symbol | |
ID | 4672448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 1743840 |
End bp | 1744793 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639838770 |
Product | inner-membrane translocator |
Protein accession | YP_985947 |
Protein GI | 121594051 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCTTG AGTTTTTCGT GATCTCCCTG CTCAACGGCG TCAGCTACGG TCTGCTGCTG TTCATGCTGA GTTCGGGACT GACGCTGATC TTCAGCATGA TGGGCGTGCT CAACTTCGCG CACACCAGTT TCTACATGCT GGGCGCGTAC TTTGCGTACA CCTTGTCGGG TGCCATCGGC TTCTGGCCCG CGCTGGTGGT GGCACCGCTG CTGGTGGGGG CGTTGGGCGC GGTCTTCGAG CGCTATGCAC TGCGCCGCGT GCACAAGTTC GGCCATGTGC CCGAGCTGCT GGTCACCTTT GGCCTGTCGT ACCTGATCCT GGAGGTGGTG CAGCTGGTGT GGGGGCGCTC CACCGTGCCC TATGGCCTGC CTGCGCAACT GCAGGGGCCG CTCTTCACCC TGTACGGCAC GCAGTTTCCC AAGTCGCGCT CCTTCGTCAT GCTGGTGGCG GTGCTGATGC TGCTGTCGGT CTGGCTGCTG CTCACGCGCA CCCGCATCGG GTTGGTGATC CAGGCGGCGC TCAAGCATCC GCACATGGTG GAGGCCCTGG GCCACAACGT GCCGCGCGTG TTCATGCTGG TGTTTGGCGG CGGCTGCGCG CTGGCGGGGC TGGCCGGCGT GATCGGCGGC AATACCTACG TGACCGAGCC GGCCATGGCG GCCTCGGTGG GCTCCATCAT CTTCGTGGTG GTGGTGGTCG GGGGCATGGG GTCGCTGGCG GGGGCGTTCC TGGCGTCACT CATCATCGGA CTGGTGCAGA CCTTTGCGGT GGCGCTGGAC TATTCGCTGG TGCATGCCTT CGCGCGGCTG GGTGTGCAGG TCACCGAACA GACCTTTGGC TACCCGCTAT TCAAGCTCAC CATCTCGCAG GTGGCGCCGA TCCTGCCGTA CCTGTTCCTC GTTCTGATCC TGATCTTCCG GCCCAAGGGC CTGCTGGGCA CGCGGGAGGA TTGA
|
Protein sequence | MNLEFFVISL LNGVSYGLLL FMLSSGLTLI FSMMGVLNFA HTSFYMLGAY FAYTLSGAIG FWPALVVAPL LVGALGAVFE RYALRRVHKF GHVPELLVTF GLSYLILEVV QLVWGRSTVP YGLPAQLQGP LFTLYGTQFP KSRSFVMLVA VLMLLSVWLL LTRTRIGLVI QAALKHPHMV EALGHNVPRV FMLVFGGGCA LAGLAGVIGG NTYVTEPAMA ASVGSIIFVV VVVGGMGSLA GAFLASLIIG LVQTFAVALD YSLVHAFARL GVQVTEQTFG YPLFKLTISQ VAPILPYLFL VLILIFRPKG LLGTRED
|
| |