Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1678 |
Symbol | |
ID | 4672395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 1740754 |
End bp | 1742391 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639838768 |
Product | long-chain-fatty-acid--CoA ligase |
Protein accession | YP_985945 |
Protein GI | 121594049 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGGCC TGATGCAGAG CCAACCTCTC TTGATTTCCT CGTTGATCTC GTTCGCCGAG CGTCACCATG GCGACGGGGA AATCGTCTCG CGCCGCGTGG AGGGGGACAT CCATCGCTAC ACCTATCGCG ACCTGGCCCG GCGTTCGCGC CAACTGGCCA ATGCCCTGGA TGCGCTGGGC CTGCAGTTCA GCGACCGCGT GGCCTCGCTC GCCTGGAATG GCTACCGCCA CATGGAGATG TACTTCGGCG TGAGCGGCTC GGGCCGCGTG CTACACACCA TCAACCCGCG CCTGCACCCT GACCAGATCG CCTGGATCGT GAACCATGCC GAGGACCAGG TGCTGTGCTT CGACATGACC TTCCTGCCGC TGGTGCAGGC CGTGCATGCC AAGTGCCCCA CGGTCAAGAA ATGGGTGGCG CTGTGCGACA GCGACAAGCT GCCTGCGGAC TCGGGCATCC CCGGCCTTAC CAGCTATGAA GACTGGATCG GCGGCGCGTC GGCCGAATAC CAGTGGCCCA CGTTCGACGA GAACTCCGCG TCCAGCATGT GCTACACCAG CGGCACCACG GGCAACCCCA AGGCGGCGCT GTACAGCCAC CGCTCCACCA CGCTGCATGC CTATGCCGCT GCGCTGCCCG ATGTGATGAA CCTCTCGGCG CGCGACGCGG TGCTGCCCGT GGTGCCGATG TTCCACGTCA ACGCCTGGGG TATCCCGTAC TCGGCGGCCC TCACGGGCTG CAAGGTGGTG TTCCCCGGCC CCGCGCTGGA CGGCAAGTCG GTCCATGACC TCATCGAGGC CGAGGGCGTG ACCTTTGCCG CGGGCGTGCC CACCGTGTGG CAGATGCTGC TCAACCATGT GAAGTCCGCG GGCCTGAAGT TCAGCACCCT GCGCCGCACG GTCATCGGCG GGTCGGCCTG CCCGCCCGCC ATGATCACGG CCTTCCAGGA CGAGTACGGC GTGTCCGTGC TGCACGCCTG GGGCATGACC GAGATGAGCC CGCTGGGCAC GCTGTGCACG CTCAAGAACA AGCACCTGCA GATGGGCAAG GACGAGCAGA TGCACATCCT GCAAAAGCAG GGCCGCGCCA TCTATGGCGT GGACATGAAG ATCGTCGGCG CCGATGGCCA GGAGCAGCCC TGGGACGGCA AGAGCTATGG CGACCTGCTG GTACGCGGCC CCTGGATCCT GGACAGCTAC TACAAGGGCG AGAGCCCGCT CGTCAAGGAC GAGCAGGGCC GGGGCTGGTT CCCCACGGGC GACGTGGCCA CCATCGACCC GGACGGCTTC ATGCAGATCA CCGACCGCAG CAAGGATGTG ATCAAGTCCG GCGGCGAGTG GATCAGCTCC ATTGACATCG AGAACATCGC CATGGCGCAC CCCGCCGTGG CGATGGCGGC CTGTGTCGGC ATGCCGCACC CCAAGTGGGA TGAACGCCCG ATCGTCGTGG TGGCCCTGCG TCCGGGCGCC CAGGTCACGC GCGAGGAGCT GCTCAAGTTC TACGAGGGCA AGACCGCCAA GTGGCAGATC CCCGATGACG TGGTGTTCGT CGATGCGATC CCGCTGGGCG CCACCGGCAA GATGCTCAAG ACCCGCCTGC GCGAGCAACT GGCGGGCTAT CAGTTGCCCG GCCTGTGA
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Protein sequence | MLGLMQSQPL LISSLISFAE RHHGDGEIVS RRVEGDIHRY TYRDLARRSR QLANALDALG LQFSDRVASL AWNGYRHMEM YFGVSGSGRV LHTINPRLHP DQIAWIVNHA EDQVLCFDMT FLPLVQAVHA KCPTVKKWVA LCDSDKLPAD SGIPGLTSYE DWIGGASAEY QWPTFDENSA SSMCYTSGTT GNPKAALYSH RSTTLHAYAA ALPDVMNLSA RDAVLPVVPM FHVNAWGIPY SAALTGCKVV FPGPALDGKS VHDLIEAEGV TFAAGVPTVW QMLLNHVKSA GLKFSTLRRT VIGGSACPPA MITAFQDEYG VSVLHAWGMT EMSPLGTLCT LKNKHLQMGK DEQMHILQKQ GRAIYGVDMK IVGADGQEQP WDGKSYGDLL VRGPWILDSY YKGESPLVKD EQGRGWFPTG DVATIDPDGF MQITDRSKDV IKSGGEWISS IDIENIAMAH PAVAMAACVG MPHPKWDERP IVVVALRPGA QVTREELLKF YEGKTAKWQI PDDVVFVDAI PLGATGKMLK TRLREQLAGY QLPGL
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