Gene Ajs_1678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1678 
Symbol 
ID4672395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1740754 
End bp1742391 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content66% 
IMG OID639838768 
Productlong-chain-fatty-acid--CoA ligase 
Protein accessionYP_985945 
Protein GI121594049 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGGCC TGATGCAGAG CCAACCTCTC TTGATTTCCT CGTTGATCTC GTTCGCCGAG 
CGTCACCATG GCGACGGGGA AATCGTCTCG CGCCGCGTGG AGGGGGACAT CCATCGCTAC
ACCTATCGCG ACCTGGCCCG GCGTTCGCGC CAACTGGCCA ATGCCCTGGA TGCGCTGGGC
CTGCAGTTCA GCGACCGCGT GGCCTCGCTC GCCTGGAATG GCTACCGCCA CATGGAGATG
TACTTCGGCG TGAGCGGCTC GGGCCGCGTG CTACACACCA TCAACCCGCG CCTGCACCCT
GACCAGATCG CCTGGATCGT GAACCATGCC GAGGACCAGG TGCTGTGCTT CGACATGACC
TTCCTGCCGC TGGTGCAGGC CGTGCATGCC AAGTGCCCCA CGGTCAAGAA ATGGGTGGCG
CTGTGCGACA GCGACAAGCT GCCTGCGGAC TCGGGCATCC CCGGCCTTAC CAGCTATGAA
GACTGGATCG GCGGCGCGTC GGCCGAATAC CAGTGGCCCA CGTTCGACGA GAACTCCGCG
TCCAGCATGT GCTACACCAG CGGCACCACG GGCAACCCCA AGGCGGCGCT GTACAGCCAC
CGCTCCACCA CGCTGCATGC CTATGCCGCT GCGCTGCCCG ATGTGATGAA CCTCTCGGCG
CGCGACGCGG TGCTGCCCGT GGTGCCGATG TTCCACGTCA ACGCCTGGGG TATCCCGTAC
TCGGCGGCCC TCACGGGCTG CAAGGTGGTG TTCCCCGGCC CCGCGCTGGA CGGCAAGTCG
GTCCATGACC TCATCGAGGC CGAGGGCGTG ACCTTTGCCG CGGGCGTGCC CACCGTGTGG
CAGATGCTGC TCAACCATGT GAAGTCCGCG GGCCTGAAGT TCAGCACCCT GCGCCGCACG
GTCATCGGCG GGTCGGCCTG CCCGCCCGCC ATGATCACGG CCTTCCAGGA CGAGTACGGC
GTGTCCGTGC TGCACGCCTG GGGCATGACC GAGATGAGCC CGCTGGGCAC GCTGTGCACG
CTCAAGAACA AGCACCTGCA GATGGGCAAG GACGAGCAGA TGCACATCCT GCAAAAGCAG
GGCCGCGCCA TCTATGGCGT GGACATGAAG ATCGTCGGCG CCGATGGCCA GGAGCAGCCC
TGGGACGGCA AGAGCTATGG CGACCTGCTG GTACGCGGCC CCTGGATCCT GGACAGCTAC
TACAAGGGCG AGAGCCCGCT CGTCAAGGAC GAGCAGGGCC GGGGCTGGTT CCCCACGGGC
GACGTGGCCA CCATCGACCC GGACGGCTTC ATGCAGATCA CCGACCGCAG CAAGGATGTG
ATCAAGTCCG GCGGCGAGTG GATCAGCTCC ATTGACATCG AGAACATCGC CATGGCGCAC
CCCGCCGTGG CGATGGCGGC CTGTGTCGGC ATGCCGCACC CCAAGTGGGA TGAACGCCCG
ATCGTCGTGG TGGCCCTGCG TCCGGGCGCC CAGGTCACGC GCGAGGAGCT GCTCAAGTTC
TACGAGGGCA AGACCGCCAA GTGGCAGATC CCCGATGACG TGGTGTTCGT CGATGCGATC
CCGCTGGGCG CCACCGGCAA GATGCTCAAG ACCCGCCTGC GCGAGCAACT GGCGGGCTAT
CAGTTGCCCG GCCTGTGA
 
Protein sequence
MLGLMQSQPL LISSLISFAE RHHGDGEIVS RRVEGDIHRY TYRDLARRSR QLANALDALG 
LQFSDRVASL AWNGYRHMEM YFGVSGSGRV LHTINPRLHP DQIAWIVNHA EDQVLCFDMT
FLPLVQAVHA KCPTVKKWVA LCDSDKLPAD SGIPGLTSYE DWIGGASAEY QWPTFDENSA
SSMCYTSGTT GNPKAALYSH RSTTLHAYAA ALPDVMNLSA RDAVLPVVPM FHVNAWGIPY
SAALTGCKVV FPGPALDGKS VHDLIEAEGV TFAAGVPTVW QMLLNHVKSA GLKFSTLRRT
VIGGSACPPA MITAFQDEYG VSVLHAWGMT EMSPLGTLCT LKNKHLQMGK DEQMHILQKQ
GRAIYGVDMK IVGADGQEQP WDGKSYGDLL VRGPWILDSY YKGESPLVKD EQGRGWFPTG
DVATIDPDGF MQITDRSKDV IKSGGEWISS IDIENIAMAH PAVAMAACVG MPHPKWDERP
IVVVALRPGA QVTREELLKF YEGKTAKWQI PDDVVFVDAI PLGATGKMLK TRLREQLAGY
QLPGL