Gene Ajs_1672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1672 
Symbol 
ID4671950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1736179 
End bp1736949 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content62% 
IMG OID639838762 
Producthypothetical protein 
Protein accessionYP_985939 
Protein GI121594043 
COG category[S] Function unknown 
COG ID[COG3503] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGACGA TCGCTCAAAA AACTGCCGAG AGACGCCATG ACCGACTGGA CGCATTGCGC 
GGGTTCGCCA TGGTATGGAT GACGGCCTTC CATTTCTGCT TCGACCTCAG CCATTTTGGC
TACTGGCCCC AGGACTTCCG GGCAGATCCC TTGTGGACTG TGCAGCGAAC CCTCATCGTC
AGTCTGTTCC TGGGATGTGC GGGGCTGGGA CAAGCGGTGG CTTGGCAACG TCAGGTTGGG
TGGGCGCGTT TCGCCCGGCG CTGGAGCCAG ATCACGGCCT GTGCATTGCT GGTAACGGTT
GGGTCTTTTC TGATGTTCCC GCGCAGTTTC ATTTACTTTG GTGTGCTGCA TGGCATGGCA
GTGATGCTCG TCATCACGCG GCTGACGGCA GGGTGGGGCA GGTGGCTGTG GTTGGCCGGG
CTGCTGGCAC TGGTGTCGCC TTGGGTCGCA GGCTGGGCGC TGCAGGGGCC TCTTTCAGAA
TGGGCGCCGC TATTCAATGG ACGGGGCCTT AACTGGTTGG GCTGGATTTC GCGAAAGCCC
TTTACCGAGG ACTATGTGCC GCTCTTTCCG TGGCTGGGCG TCATGTGGTG GGGGATGGCG
GCGGGGCAGT GGCTCGTTGT GCGTTCGGAC GGCTGGCTGT CCCGCCCGTT GCCGCGTGTG
GTAGCGCCCC TGGCTGGTTT GGGACGCTAT AGCCTCAGCT ATTACATGCT GCACCAGCCC
GTCCTGATTG GAGGACTGTT GCTGGCAGGC TGGCTGGCGG GACGGGCATA A
 
Protein sequence
MLTIAQKTAE RRHDRLDALR GFAMVWMTAF HFCFDLSHFG YWPQDFRADP LWTVQRTLIV 
SLFLGCAGLG QAVAWQRQVG WARFARRWSQ ITACALLVTV GSFLMFPRSF IYFGVLHGMA
VMLVITRLTA GWGRWLWLAG LLALVSPWVA GWALQGPLSE WAPLFNGRGL NWLGWISRKP
FTEDYVPLFP WLGVMWWGMA AGQWLVVRSD GWLSRPLPRV VAPLAGLGRY SLSYYMLHQP
VLIGGLLLAG WLAGRA