Gene Ajs_1669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1669 
Symbol 
ID4671739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1733742 
End bp1734911 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content65% 
IMG OID639838758 
ProductCBS domain-containing protein 
Protein accessionYP_985936 
Protein GI121594040 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCAC CCCCATTCCC TCGCACAGAC GCTGCGGTAG AGCCGCCGAC GTCAGTCTTG 
CGGCGCGTCG CTGGCTGGCT GCGCCTTTTC TGGCCGGCAC CCGCTGGCGT CAATCAGCGC
GAACGCTTGC GCATGGTGTC GGGTATCACG CTTTGCGTGG CCGTGGTGGC GCTGTTTGCG
CATTGGTTCG GGGCTGGCCT GCCGGTCCCG TGGATGGTGG CCTCCCTGGG CTCCAGCGCG
GTGCTCATCA TTGCGATGCC GTCCAGCCCC CTCGCCCAGC CGTGGCCAGT GCTGGCGGGC
AGCGTGCTGT CGTACATGGT AGGCGTTGCC TGCGCCACGC TGGTTCCCCA CGTCGCTCTG
GCCTGCGGCG CAGCCGTGGG ACTTGCCGTG GCGGTCATGC TGGCATTGCG CTGCCTGCAC
CCCCCCGGCG GGGCGATGGC CTTGTTCGCT GTGCTCAATC CGCAGGACGG CGCGGCTTTT
GCGGTATTTC CGGTGCTGCT CAATATGCTG GCGCTGGTGT TGATGGGGAT GGCCTTCAAT
CACTTGACCG GGCGCAGCTA TCCGCATGCA CAAAGAGCGC GGGGGGCCGC GCATAAGGGA
TCTGGCGCTT TCATCTCGGC GGATTTGGAT GCCGCCTTAT CGCACTACAA CCAAGTGCTG
GATGTCAGTC GCGCCGACCT GGAGGGGCTT TTGCACTTGG CTGGCAAAGC CGCCTTCCAG
CGCACGCTTG GCGAGCTGCG ATGCGGCGAG ATCATGTCAT CACCGGTGCA TGCGGTGGTT
GCCGAGACGC CCCTCAAGGA TGCCTGGGCG CTCATGCGCA AGCACGCCGT CAAGGCGTTG
CCGGTAGTGG ACGGGGCGCG CAGGGTGGTC GGCATCGTCA CGGTGGCAGA CTTCATGCGC
CTGGCCAATC TGGACATGCA TGAAGGCATG GGCCAGCGTC TACGCTCGCT CATCATGGGG
CGGCCCAAAC GTCCCGAGCA AGTGCAAGGC CTGATGTCGT CTCCCGTGCA GCAGGTGCTG
TCTGAACAGC ATGTGATGGA TCTGGTGCCT CTGTTCTCCG AGGCGGGGCA CCACCACATT
CCGGTGGTGA ACGATGCGCA GGAACTGGTT GGCATCATCA CGCAGACGGA CCTTGTGAAG
ACCTTGGCTG CCGCGGTTGC CCGGCCATAG
 
Protein sequence
MSAPPFPRTD AAVEPPTSVL RRVAGWLRLF WPAPAGVNQR ERLRMVSGIT LCVAVVALFA 
HWFGAGLPVP WMVASLGSSA VLIIAMPSSP LAQPWPVLAG SVLSYMVGVA CATLVPHVAL
ACGAAVGLAV AVMLALRCLH PPGGAMALFA VLNPQDGAAF AVFPVLLNML ALVLMGMAFN
HLTGRSYPHA QRARGAAHKG SGAFISADLD AALSHYNQVL DVSRADLEGL LHLAGKAAFQ
RTLGELRCGE IMSSPVHAVV AETPLKDAWA LMRKHAVKAL PVVDGARRVV GIVTVADFMR
LANLDMHEGM GQRLRSLIMG RPKRPEQVQG LMSSPVQQVL SEQHVMDLVP LFSEAGHHHI
PVVNDAQELV GIITQTDLVK TLAAAVARP