Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1663 |
Symbol | |
ID | 4671338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 1727504 |
End bp | 1730191 |
Gene Length | 2688 bp |
Protein Length | 895 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639838752 |
Product | hypothetical protein |
Protein accession | YP_985930 |
Protein GI | 121594034 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCACCTTG ATGAATCCAT GTTCCCTTTT TCTTCACGTA GCAAAATGTC CGACGCATCT GACGCGACCC CGGTCCCTGC CAAAACCAGC GAGCCGCATC CCCTTGATGC ATTGACGGGC GGCGCTTTCT CTGCGGCCAC GTCGGGTGAA CGCTCGGCAC GCATCCGTGA ATGGTTGTCT ACCCAGCCTG GCGTGGAAAA GCTCCAGGAA GTATTCAAGG AATTGAGTGC GCGGGACAAA GGCGCCGCGC GCGCAGTGCG TGAGCGACTG GACGAGATTC GGCGCGCGGA GGGCCAGGAG GCGATCGCCG CCGAATGGGC AGCCAAGGCC GAAGCGCTGC TCGCAGCCGC CAAGCTCAAC ATTGCCGACG CGCTCGCCTG GCAGCGCGAT GCGGCCAAGG CCGGCGCGCC GCTGTCCCGT GAACCTCTGT CGGTGCTCAA ACAGCGTCTT AACGAGCGCG TGAAAACCAT CGAAGACCTG CAGCATCGTG TTCAGGTGCA GCGCGAAGCC GCCGTTCTGC TCGCGCAGCG CATCGAAGTG CTCTCCACCA AACCGTGGAA GGATGCGCAG TCTGCGCTGG AACTGCTGAA CGCCGATGTC GGCCGCTGGC AGGAGCAGGC CCAGGCACTT GCCGACGACA GTGCCTGGCC CAGCGTAGAG GCACGTTTTC CCGCCTTGCT CGATGCTTCG CGCACCCAAC TGCTGGTGGT GTGGGAAGCG TTTCAGTCGG CATTGGCGCA GGCTGTCCTT GCGGCAGAAG ACCCCTCGGC TCCCCTGCCG CCCGTGCCCG TGTGGTCCGA CGAACTGCGC CAGGCGCGCG GGCTACCCCC AGAAGCGGGT GCCGCCGCCA AGACGCCTGC CCCCCGCTCA TCCAAGCCGC AGGCGACTCC TGAAATGCGC GAGAAGGCCC TGCAGGCCGT TCAGGAGGCC CTGGCCAAGC TGGAGCAGGA AACCGCGCAG GGCCATGGCA AGGCCAGCGC TGGCGCCGCG ACTGCGCTGC GCGCCGTGCT TAAGGTACAC GGCAAGTTGA TCGATGCCGA ACTGGAGCAG AAAGTGCACG CCGCCCTCGT GGCCGCGGGC GAGTTGGAGG GCTGGCAGCG CTGGAGCGCC GACCAGGTGC GCGAGGATCT CGTGGCCCGG GCCGAGGCAC TGCTGCGCAG GCCGGAAGGA CAGTCCCTCG GTGGGCGCAA GATGCAGGAA ACGCTGCGCC AGCTGCGCGA GCAGTGGAAG CAGGCCGACC AGGGGGCGCC GGCCAACCAC GCCCTGTGGA AGAAATTCGA CGATGCGTGC AATGCCGCGC ACAAGGTGGT CGAGGGCTGG CTGGAGAAGG TGCGTGCCGA AGGTGCCGAA CACCGTGCGC AGCGGTTGGC GCTGATCGAA GAGGTGAATG CCTGGGCCCA ATCGCAAGCC GCTGCCGCTG CGCAGGACTG GAAGTCCTTC AGTCGTGCAT TGCACCAGTT TGCCGAGCGT TGGCGCACCG GTGGCCATGT GAGCGAAAAA ATGTTCGCTG AACTGCAGCC ACTGTGGAAG CAGGCACTGG CGGCTGCCAG CGCTCCGCTG GAGGCTGCGC AGAAGGCCAG CCTGGAGCGC CGCCACGCCA TGATCGACGA GGCAGGTGCC CTGGGTGCGG CCCCAAGTCT GCGCATCGAT GCCATCAAGG CCTTGCAGCA GCGTTGGCAG GCCGAGGCGC AGGCGGTGCC GCTGGATCGC AAGCATGAGC AGAAGCTCTG GGACGCGTTC CGCAAGCCCA TCGACGAGGC GTTCAACCGC AAGTCGGCCG AACGTGAGCG CAGTGCCTCC GAGTTGAGCG CGCGCGACCG GGCCGTGCTG GAGGCATCCA AGGCGCTGGA GGCCGCCAAT GCGTCGGGCG ATGCGCAGAA GATCCGCGGT GCCATGGCCG CGCTGGAGCG CGCGCTGAAG GAGCCTGCCG GCGAATCGGG GGATTCCGAG AATTTGGATA AAAAAGCCGA TCAAACCATT GATGGTCAAG CGCAAGCAGC TACTGATTCG GTAGCAGATC AAAACGATGC GCCGACTTCC AAACCCGTGC CTGCGGCGCG CCCGGTGGTG GCCGTGCGTG GCGATGACCG GCCGGGGGCG CGCAAGGCGG TGCCCGCGCA GCCCACGGTC ACCGGCCGTG GTGGCGACCG GCGTGACGGC CGCGGCCCAC GGGACAGCGG TATGCAGGGG CGGGGGCGGG AGCGCGATGG TGTTGCTGCT GCGCGAGGTC CGCGTCTGGG TGATGCGGCT TTCCGCGCGC AACGCGACGC CATGGAGCAT GCGCAGGGCG CGCTGCGCAA GCTGGCGGCA CAGGCCCATG GCGAAGCGCT CACGCAGCTG TTGTCGGCCT GGAGAAGCCG CGACGCTGCG CAATTGCCCA GCGTCCAGGA ACTGGGCGGC AAGGTGCCCC CCACGGCGCG CACCGCCTGG TCGCAGGCGC TTGCGGCACC TGCGGCCGGG GGAGCCCCGG AAGCATTGCT GCGGCTGGAG ATCGCGGCGG AGGTCCCGAC GCCCGCAGAC CAACTGGCCG CACGGCGTGC TCTGCAGCTG CAGTTGCTCA CACGTCGCAA CGATCCCTCG CCGGCGCAAA CCTGGACGCA GGATGTGGCG CGCGTGCTGG AAGGCGCCAG CGACGAGGCG GGCGCGCGCC GCCTGCAGAG CGCATTGAAG GTCCTGCTCG GCAAATAG
|
Protein sequence | MHLDESMFPF SSRSKMSDAS DATPVPAKTS EPHPLDALTG GAFSAATSGE RSARIREWLS TQPGVEKLQE VFKELSARDK GAARAVRERL DEIRRAEGQE AIAAEWAAKA EALLAAAKLN IADALAWQRD AAKAGAPLSR EPLSVLKQRL NERVKTIEDL QHRVQVQREA AVLLAQRIEV LSTKPWKDAQ SALELLNADV GRWQEQAQAL ADDSAWPSVE ARFPALLDAS RTQLLVVWEA FQSALAQAVL AAEDPSAPLP PVPVWSDELR QARGLPPEAG AAAKTPAPRS SKPQATPEMR EKALQAVQEA LAKLEQETAQ GHGKASAGAA TALRAVLKVH GKLIDAELEQ KVHAALVAAG ELEGWQRWSA DQVREDLVAR AEALLRRPEG QSLGGRKMQE TLRQLREQWK QADQGAPANH ALWKKFDDAC NAAHKVVEGW LEKVRAEGAE HRAQRLALIE EVNAWAQSQA AAAAQDWKSF SRALHQFAER WRTGGHVSEK MFAELQPLWK QALAAASAPL EAAQKASLER RHAMIDEAGA LGAAPSLRID AIKALQQRWQ AEAQAVPLDR KHEQKLWDAF RKPIDEAFNR KSAERERSAS ELSARDRAVL EASKALEAAN ASGDAQKIRG AMAALERALK EPAGESGDSE NLDKKADQTI DGQAQAATDS VADQNDAPTS KPVPAARPVV AVRGDDRPGA RKAVPAQPTV TGRGGDRRDG RGPRDSGMQG RGRERDGVAA ARGPRLGDAA FRAQRDAMEH AQGALRKLAA QAHGEALTQL LSAWRSRDAA QLPSVQELGG KVPPTARTAW SQALAAPAAG GAPEALLRLE IAAEVPTPAD QLAARRALQL QLLTRRNDPS PAQTWTQDVA RVLEGASDEA GARRLQSALK VLLGK
|
| |