Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1661 |
Symbol | |
ID | 4671157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 1722030 |
End bp | 1722869 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639838750 |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_985928 |
Protein GI | 121594032 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCGT CAGGAAATGT GATTGCCGGC GTCCGCACGT TTGCGGGCGA TGTGATCAAC GGTTTTCTGG AAGTGACACA CAGCGGCTTC GCCCTGCTCG GACTGGGCGT CGTCTTTGGC GTGATCACAC TTACGGCACG CCCGGATCTG CGCCAGGCAG GAGAAGAAGA ACTCATGGGC TGGCTGCAGG CCCGCCAGGA AGCCGTAGTG GGCTTCCCTA TGGAGCCCGC CGCAAGCGAG CGGGCAGTAG CGCTCAACCC CAAGGAGTTG CCGCGGGAAC AGGCTGCCGT GGCCTACTGG CTCAGCAAGA AGTACCGCGT GGCGCCCGAA CCGCTGGCGG CACTGGTCAC CGAGGCGTAT GAAATCGGCG CGCGGACCAA GCTGGATCCC ACCTTGATCC TGGCCGTCAT GGCCGTGGAA TCGAGCTTCA ACCCGTTTGC ACAAAGCCCG GTAGGTGCGC AAGGCTTGAT GCAGGTGATG ACGCGTGTGC ATACCGACAA GTACGAAGGC TTTGGTGGGC ACCTGGCGGC ATTCGATCCC GTGGCCAACC TGCGCGTGGG CGTGAAGGTG CTGCAGGAGT GCATCGCGCG CGCCGGCTCG CTGGAAGGCG GACTGCGTTA CTACGTCGGC GCAGCCAACC TGCCTGACGA CGGGGGCTAC GCCGCCAAGG TACTGGCGGA GCATTTCCGG CTGCGACAGG TCGCCAATGG TCGCACGGGC GTTTCTCCCG CCGGCCCCGT GAATCCACCT CTCTTGTCCA CCAAGGCTCC TGCCACACCG GAAGCCGCAC CTGCAACCCC TGCCACTGGC GAGAAGGTGG CCCTGCTGAG CGGCCTCTGA
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Protein sequence | MTASGNVIAG VRTFAGDVIN GFLEVTHSGF ALLGLGVVFG VITLTARPDL RQAGEEELMG WLQARQEAVV GFPMEPAASE RAVALNPKEL PREQAAVAYW LSKKYRVAPE PLAALVTEAY EIGARTKLDP TLILAVMAVE SSFNPFAQSP VGAQGLMQVM TRVHTDKYEG FGGHLAAFDP VANLRVGVKV LQECIARAGS LEGGLRYYVG AANLPDDGGY AAKVLAEHFR LRQVANGRTG VSPAGPVNPP LLSTKAPATP EAAPATPATG EKVALLSGL
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