| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1654 |
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| Symbol | |
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| ID | 4670746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1713042 |
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| End bp | 1715780 |
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| Gene Length | 2739 bp |
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| Protein Length | 912 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639838743 |
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| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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| Protein accession | YP_985921 |
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| Protein GI | 121594025 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.291217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.252926 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCTGC CCCCAACCAC CGATGCCCGC GGCACCCCGT GGCATGCGCT GTCCGCTGGC
GAAGCGCTGC GACGGCTGCA AACCGACGAC CGCCACGGCC TGGCGCATGC CGAGGTGGCG
CGGCGCCTGG CACGCTTCGG CCCCAACCGC CTGCCCGCGC CGCCGCGCCG ACCGGCCTGG
CTGCGCCTGC TGCAGCAGTT CCACAACGTG CTGATCTACG TGATGCTCGC TGCCGCGACG
GTCACCGCGG CACTGGCGCA CTGGATCGAC ACCGGGGTGC TATTGGGGGC CGTGATCGTC
AACGCCATCA TCGGTTTCTT GCAGGAGGGC AAGGCCGAGT CGGCGCTGCA CGCGATACGC
CGCATGCTCT CGCAGCAGGC CACGGTGCTG CGCGGGGGAG AGCGCCAACT GGTGGCCGCC
GACCAGCTCG TGCCGGGCGA CATCGTCATC CTCGCGTCCG GCGACAAGGT GCCTGCGGAC
CTGCGCATCC TCACGGCCCG CAGCCTGCGC GCCGACGAGG CCGTGCTGAC GGGCGAGTCC
GTGCCCTGCG ACAAGGACGA AACCGCCGTG GCAGCCGACG CCGCTTTGGG CGACCGCCGC
AGCATGCTCT ACTCCGGCAC GCTGGTGGCC GCGGGCACCG CTTTGGGCAC CGTGGTGGCC
ACGGGCACGA ACAGTGAACT GGGGCGCATC AGCACGCTAT TGGCCCAGGT GCAGGCGAGC
ACCACGCCGC TGCTGCGGCA GATCGCGCAG TTCAGCCGCT GGCTGGCGCT GGCCATCGGG
CTGTTCGTGC TCGCCACGTT CGCCATCGGC GTGCTCTGGC GCGCTCAGGC ACCCGCGGAC
ATGTTCATGA TGGCCGTGGC GCTGGCGGCC TCGGCCATCC CCGAGGGGCT GCCCGCCATC
ATGACCATCA CCCTGGCCAT GGGCGTGCGG CGCATGGCGC AGCACAACGC CATCATCCGC
CACCTGCCGG CAGTGGAAAC GCTGGGAGCC GTCACGGTGA TTTGCTCCGA CAAGACCGGC
ACCCTCACTT GCAACGAGAT GACCGTGCAG CGCGTGGTGA CCGCCGACCA TGTCATAGAG
GTGACCGGCA GCGGCTATGC GCCGCAGGGG GGCTTCCTCA TCGGGGGCGT GCCCATCACT
GCGCAAGAAC ACCCTGCCCT GCAGTCCGTG GCCCAGGTGG CGCTGCTGTG CAACGACGCC
GCGCTGCACG ACGGTCCCCA GGGCTGGAGC CTGACGGGCG ACCCGACGGA GGGCGCGCTC
GTCACCCTGG CGCTCAAGGC GGGGCTGGAC GCAACGGCGC TGCATGCCCG CCAGCCGCGC
ATCGACGCCA TACCGTTCGA GTCCGAGCAC CGCTTCATGG CCACACTGCA CCACGACCAC
GCGGGGCATG CGGTGATCCT GGTGAAAGGA GCGCCCGAGC GTGTGCTGGA CATGTGCAAC
GCACAGCGCC AGTGGCCCGC CGATGGCGCG GGCACCGATG CCCCGCTGCA GCACGACTAC
TGGCGCCGTG CGGCCAACGA CTGCGCGGCG CGGGCGCTGC GCGTGCTGGC GATCGCCATC
AAGCGCGTGC CGGCGCAGCA GCACGCGCTG CAGTTCGCCG ACATGGAGGG CGGCTTCACG
CTGCTCGGGC TGCTGGGCAG CATGGACCCG CCGCGCCCCG AGGCCGTGGC CGCGGTGGCC
GAATGCCAGG CCGCGGGTGT ACGCGTAAAG ATGATCACCG GCGACCACGG CGAAACCGCA
CGTGCGATTG GCGCGCAGCT GGGCATCGGC CTGGGCCGCC CCGCCCTCAC GGGCGCCGAG
ATCGAGCTGC TGGACGACGC CGCCTTGCGC GACGTGGTGG CCAGCGTGGA CGTGTTCGCC
CGTGCCAGTC CCGAACACAA GCTGCGCCTG GTGCAAGCCC TGCAGTCCCG CGGTGAAGTC
GTGGCCATGA CGGGCGACGG CGTGAACGAC GCGCCCGCAC TCAAGCGCGC CGACGTGGGT
GTCGCCATGG GCAGGAACGG TACCGAGGCC GCCAAGGACG CAGCCGCCAT GGTGCTGACC
GACGACAACT TCGCCACGCT GGGCCATGCG GTGCGCGAGG GCCGGGGCAT CTACGACAAC
GTGCGCAAAT TCATCCTGTT CATGCTGCCC ACCAACGGGG GCGAGGCGCT GATCGTGTTT
GCCGCCATCG CATTCGGCCT GCTGCTGCCG CTCACCGCGG CGCAGGTGCT GTGGATCAAC
CTGGTCACGT CCAGCACGCT GGGCGTGGCG CTGGCATTCG AGCCTGCGGA GGACGACGTC
ATGCGCCGCC CTCCCCGGCC TCCGCAGGAA AAGCTGCTGT CCGGCCTGTT CGCGTGGCGT
GTGCTCATGG TGGCGGTTTG CATGGCGGCG GCCTCGCTCG GGCTGTTCCT GTGGGAGCTG
GCCAACGGCG CTGCGATCGA AACCGCGCGC ACCATGGCTG TCAGCGCGGT GGTGGTGATG
GAGATGTTCT ACCTGCTCAA CAGCCGGCAC ATCGAGCGCA GCGTGCTGTC GCGCGAGGGC
CTGCTGGGCA ATCCCAAGGT GCCGCTGACC ATCGCCCTCT GTGCGCTGCT GCAACTGGGC
TTCGTGCACC TGCCCTGGAT GCAGGCCGTG TTCGGCTCCA CGGACCTGTC TGTGCAGGAA
TGGTCGCGCG TCCTGCTGGC CGGGCTGGCC GTCTTCACGC TGGCCGAACT GGAGAAGGCG
GCTCTGCGGC GCTGGCGCGC ACGCCGCGCC CATCGCTGA
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| Protein sequence | MHLPPTTDAR GTPWHALSAG EALRRLQTDD RHGLAHAEVA RRLARFGPNR LPAPPRRPAW
LRLLQQFHNV LIYVMLAAAT VTAALAHWID TGVLLGAVIV NAIIGFLQEG KAESALHAIR
RMLSQQATVL RGGERQLVAA DQLVPGDIVI LASGDKVPAD LRILTARSLR ADEAVLTGES
VPCDKDETAV AADAALGDRR SMLYSGTLVA AGTALGTVVA TGTNSELGRI STLLAQVQAS
TTPLLRQIAQ FSRWLALAIG LFVLATFAIG VLWRAQAPAD MFMMAVALAA SAIPEGLPAI
MTITLAMGVR RMAQHNAIIR HLPAVETLGA VTVICSDKTG TLTCNEMTVQ RVVTADHVIE
VTGSGYAPQG GFLIGGVPIT AQEHPALQSV AQVALLCNDA ALHDGPQGWS LTGDPTEGAL
VTLALKAGLD ATALHARQPR IDAIPFESEH RFMATLHHDH AGHAVILVKG APERVLDMCN
AQRQWPADGA GTDAPLQHDY WRRAANDCAA RALRVLAIAI KRVPAQQHAL QFADMEGGFT
LLGLLGSMDP PRPEAVAAVA ECQAAGVRVK MITGDHGETA RAIGAQLGIG LGRPALTGAE
IELLDDAALR DVVASVDVFA RASPEHKLRL VQALQSRGEV VAMTGDGVND APALKRADVG
VAMGRNGTEA AKDAAAMVLT DDNFATLGHA VREGRGIYDN VRKFILFMLP TNGGEALIVF
AAIAFGLLLP LTAAQVLWIN LVTSSTLGVA LAFEPAEDDV MRRPPRPPQE KLLSGLFAWR
VLMVAVCMAA ASLGLFLWEL ANGAAIETAR TMAVSAVVVM EMFYLLNSRH IERSVLSREG
LLGNPKVPLT IALCALLQLG FVHLPWMQAV FGSTDLSVQE WSRVLLAGLA VFTLAELEKA
ALRRWRARRA HR
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