Gene Ajs_1644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1644 
Symbol 
ID4671900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1702183 
End bp1703712 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content68% 
IMG OID639838734 
Producthypothetical protein 
Protein accessionYP_985912 
Protein GI121594016 
COG category[S] Function unknown 
COG ID[COG3333] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0974084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.013666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCT TTGACGCATT GCTCGCAGGC TTTGCCACGG CGATCACGCC GGCGAACCTG 
CTGTGGGCCC TGGTGGGCTG CGCGCTGGGA ACGGCCGTGG GTGTGCTGCC GGGCATCGGG
CCGGCGGTGG CGGTGGCCAT GCTGCTGCCC ATCACGGCCA AGGTGGACAT GACCGCCTCG
ATGATCTTCT TCGCGGGCAT CTATTACGGC GCCATGTATG GCGGCTCCAC GGCGTCCATC
CTGCTGAATA CGCCGGGCGA GACCGCCAGC ATGGTCACGG CCATGGAGGG CAACAAGATG
GCCAAGAGCG GGCGCGCGGG CGCGGCGCTG GCCACGTCGG CCATCGGCTC GTTTGTCGCC
GGCACCATCG CCACAGTGGT GGTGACGCTG TTCGCGCCGG GCGTGGCCGA GTTCGCGGTC
AAGCTCGGCC CGCCCGAATA CTTCATGCTG ATGGTGCTGG CCTTCACCAC GGTGAGCGCG
GTGCTGGGCC AGAGCAGTCT GCGCGGCATG ACGGCGCTGT TCCTGGGCCT GGCGCTGGGC
TGTGTGGGCA TGGACCAGAT CTCGGGGGCC GCCCGCTACA CCGTGGGCAA GATGGAACTG
CTGGACGGCA TCGACATCGT GCTGGTGGCC GTGGGCCTGT TCGCCGTGGC CGAGGTGCTG
TATGCGGCGC TGTACGAGGG CCGGGTGGAA GAGTCGCAGA ACCAAATGGG CCGTGTGCAC
ATGACGCGGC GCGACTGGCG CCGGTCCATT CCCGCATGGC TGCGCGGTAC CGTGATCGGC
ACGCCCTTCG GCTGCATCCC GGCGGGGGGG ACGGAGATTC CCACCTTCTT GAGCTACGCG
ACCGAAAAGC GTCTGGCCAA GGGCGAGGAC AAGGCCGAGT TCGGCACCCG TGGCGCGATC
GAAGGGGTTG CGGGCCCCGA GGCGGCCAAC AACGCCACGG TGACCGCGGC GCTCATCCCG
CTGCTGACAC TGGGCATCCC GACCAGCAAC ACCACGGCCG TGCTGCTGGG GGCCTTCCAG
AACTATGGGC TGAACCCCGG CCCGCAGCTG TTCACCACAT CGGCCACGCT GGTGTGGGCG
CTGATCGCGT CGCTGTACAT CGGCAACATC ATGCTGCTGG TGCTGAACCT GCCCATGGTG
GGGCTGTGGG TGAAGCTGCT GAAGATTCCG CGTCCACAGC TCTACGCCGG CATCCTGATC
TTTGCCACGG TGGGCGCCTA CGGCATGCGC CAGAGCACGT TCGACCTGTT CCTGCTGTAC
GGCATCGGCT TGCTGGGCGT GCTGATGCGG CGCTTCGACT TCCCTACGGC GCCCGTGGTG
GTGGGCATGA TCCTCGGGCC GCTGGCCGAG GCGCAGCTGC GCAACGCGAT TTCCATCGGC
GAGGGCAGCT GGATGATCTT CCTGCAGCGC CCCATGGCCG TGACGCTGCT GGTGATCGTG
CTGGCCGTGC TCATCGTGCC GCGCGTGCTG CGCCGCTGGG CCGAGCGCAA CCTGGCCCAT
GCGCGCCAGA GCGTGGACGA TGTGAGTTGA
 
Protein sequence
MEIFDALLAG FATAITPANL LWALVGCALG TAVGVLPGIG PAVAVAMLLP ITAKVDMTAS 
MIFFAGIYYG AMYGGSTASI LLNTPGETAS MVTAMEGNKM AKSGRAGAAL ATSAIGSFVA
GTIATVVVTL FAPGVAEFAV KLGPPEYFML MVLAFTTVSA VLGQSSLRGM TALFLGLALG
CVGMDQISGA ARYTVGKMEL LDGIDIVLVA VGLFAVAEVL YAALYEGRVE ESQNQMGRVH
MTRRDWRRSI PAWLRGTVIG TPFGCIPAGG TEIPTFLSYA TEKRLAKGED KAEFGTRGAI
EGVAGPEAAN NATVTAALIP LLTLGIPTSN TTAVLLGAFQ NYGLNPGPQL FTTSATLVWA
LIASLYIGNI MLLVLNLPMV GLWVKLLKIP RPQLYAGILI FATVGAYGMR QSTFDLFLLY
GIGLLGVLMR RFDFPTAPVV VGMILGPLAE AQLRNAISIG EGSWMIFLQR PMAVTLLVIV
LAVLIVPRVL RRWAERNLAH ARQSVDDVS