Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1633 |
Symbol | |
ID | 4673014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 1689866 |
End bp | 1691068 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639838723 |
Product | methylitaconate delta2-delta3-isomerase |
Protein accession | YP_985901 |
Protein GI | 121594005 |
COG category | [S] Function unknown |
COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.886467 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.162569 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACCAC AGATCAGGAT CCCCGCCACC TACCTGCGCG GCGGCACCAG CAAGGGCGTG TTCTTTCGCC TGCAAGATTT GCCCGCGGCG GCGCAGCAGC CCGGCGCAGC GCGCGACGCG CTGCTGCTGC GCGTGATCGG CAGCCCCGAC CCCTACGGCA AACAGATCGA CGGCATGGGC GGCGCCACCT CGTCCACGTC CAAGGCGGTG ATCGTCTCGC CCTCCACCCG GCCCGGGCAT GACGTGGACT ATCTGTTCGG CCAGGTCGCC ATCGACAGCC CCTTCGTGGA CTGGAGCGGC AACTGCGGCA ACCTGTCGGC CGCCGTGGGG CCGTTCGCCA TCGCCAGCGG CCTGGTCGCG CCCGGGCGCA TTCCGCACGA CGGCGTGTGC ACCGTGCGCA TCTGGCAGGC CAACATCGGC AAGACCATCG TCGCCCACGT ACCCGTCGCA GGTGGCCAGG TGCAGGAGAC GGGCGACTTT GCGCTGGACG GCGTGGCCTT CCCCGCCGCC GAGGTGTTGC TCGAATTCCT CGACCCGGCC GATGGCGGTG AAGGAGGCGA AGGCGGCGGC AGTGCCCTGT TCCCCACCGG CCAGCTGGTC GATACGCTGG ACGTGCCAGG CGTGGGCCGC TTGCAGGCCA CGCTCATCAA CGCGGGCATC CCGACCATCT TCCTGAACGC CAGGGACGTC GGCTGCACCG GCACCGAGCT GCAGGACGCG ATCAATGGCG ATGCCGCGGC CCTGGCCCGC TTCGAGGCCA TCCGCGCCTG GGGCGCAGTC AAGATGGGCC TGATCCACGA CGTGGCAGAG GCCGCCACGC GCCAGCACAC GCCCAAACTC GCCTTCGTCG CGCCGCCGGC GGACTACGTC GCCTCCAGCG GCACGGCAGT GCGCGCGGCC GACATCGACC TGCTGGTGCG CGCACTGTCC ATGGGCAAGC TGCACCACGC CATGATGGGC ACGGCGGCCG TGGCCATCGG CGCCGCTGCC GCCGTCCCCG GCACGCTGGT CCACCAGGCG GCCAGCGGGG GCCCGCGCAC CGCCGTGCCG GGATCGGTGC GGTTCGGCCA CCCCTCGGGC ACGCTGCGCG TGGGGGCCGA GGCCGCGCTG GTGAACGGCC AGTGGCGCGT CACCAAGGCC CTCATGAGCC GCAGCGCCCG CATCCTGATG GAAGGCTGGG TGAGAGTGCC GCCAACCCCG TGA
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Protein sequence | MAPQIRIPAT YLRGGTSKGV FFRLQDLPAA AQQPGAARDA LLLRVIGSPD PYGKQIDGMG GATSSTSKAV IVSPSTRPGH DVDYLFGQVA IDSPFVDWSG NCGNLSAAVG PFAIASGLVA PGRIPHDGVC TVRIWQANIG KTIVAHVPVA GGQVQETGDF ALDGVAFPAA EVLLEFLDPA DGGEGGEGGG SALFPTGQLV DTLDVPGVGR LQATLINAGI PTIFLNARDV GCTGTELQDA INGDAAALAR FEAIRAWGAV KMGLIHDVAE AATRQHTPKL AFVAPPADYV ASSGTAVRAA DIDLLVRALS MGKLHHAMMG TAAVAIGAAA AVPGTLVHQA ASGGPRTAVP GSVRFGHPSG TLRVGAEAAL VNGQWRVTKA LMSRSARILM EGWVRVPPTP
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