Gene Ajs_1618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1618 
Symbol 
ID4674502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1673169 
End bp1674026 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content71% 
IMG OID639838708 
Producthypothetical protein 
Protein accessionYP_985887 
Protein GI121593991 
COG category[S] Function unknown 
COG ID[COG3228] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.434907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGTA CCCGCGGACC CCTGCACTTC CTTCGCCAAC TGGCCCTGCG CGTACGCGCC 
ACCGTGGCCC CCCTCCCCGA CATCTCCGCG CAACTGTGGT TGCAGACCCT GCGGCGCTAC
CCATTCCTGC AGGCGCTGCC ACTGCATGAC CAAGGCAAGC TGCGCGCCCT GAGTGCGCTG
TTCCTGGACC GCAAGGAGTT CACCGGCGCC CATGGGCTGG TGGTGACCGA TGCCATGGCG
GTCTCGATTG CGGCCCAGGC CTGCCTGCCG CTGCTGCACT GGGGCGCTCC CGAGCGTGCG
CTGGCCTGGT ACGACGACTT CGTGGGTATC GTGGTGCATC CGGCCGAGGC CGTGGCGCGC
CGCCAGGCCG TGGATGCCGC CGGCGTGGTG CACCACTACG ACGAGGTGCT GTTGGGCGAA
GCCATGGAGC GCGGCCCCGT CATGCTGAGC TGGCCCGCCG TGGACGGGGC TGGCCAGGGC
GGACCGGACG GGCAGCCGGT CGCCACCAGC GTGGTGATCC ACGAGTTCGT GCACAAGATC
GACATGCGCA ACGGCCCGGC CGACGGCTGC CCGCCCTTGC CTCCGGGATT CATGGGCACG
CGGGACGCGC GCGCCGCGCA CGCGGCCTGG CGCGACGCCT GGGAGCCCGC GTACGAGCAG
TTCCGCGAGC AGGTCATCAT CGCCGAGCGT TTCGGCGGTG CATGGCCGTG GCTGGATGCG
TACGGCGCCA CCGCGCCCGC GGAGTTCTTC GCCGTGGCCT GCGAGGCGTA CTTCGTGCAC
CGTGAACGTT TCGGGCAGGA ATTCCCCACC CTGCTGCCCG TGCTGGATGC GTTCTTCGGC
CGGCCCCTGT CCGGCTGA
 
Protein sequence
MARTRGPLHF LRQLALRVRA TVAPLPDISA QLWLQTLRRY PFLQALPLHD QGKLRALSAL 
FLDRKEFTGA HGLVVTDAMA VSIAAQACLP LLHWGAPERA LAWYDDFVGI VVHPAEAVAR
RQAVDAAGVV HHYDEVLLGE AMERGPVMLS WPAVDGAGQG GPDGQPVATS VVIHEFVHKI
DMRNGPADGC PPLPPGFMGT RDARAAHAAW RDAWEPAYEQ FREQVIIAER FGGAWPWLDA
YGATAPAEFF AVACEAYFVH RERFGQEFPT LLPVLDAFFG RPLSG