Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1547 |
Symbol | |
ID | 4671709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 1599827 |
End bp | 1600099 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639838634 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_985816 |
Protein GI | 121593920 |
COG category | [K] Transcription |
COG ID | [COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0103504 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0779138 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCATCAT ATCCCCACCA TGCGGGGATG CCCATTACCT CGCCTCGGCA CGCCAACGAC CCGGTGCTCA TCGCACTGGG CGGTGCCATT CGCCGCAGCC GGCGCGCGCG AGGCATCTCT CAAGAAGAAC TCGCACACCG AAGTGCCATT GATCGTTCCT ATATGAGCAG CATCGAACGC GGCGGCCAGA ATCCCGGGAT CGTCTCGATA GCTCGCATCG CGAAAGCGAT GGAGATGAGC ATGACCGAAC TGATGGCCGA GGCCGAGTTG TAG
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Protein sequence | MASYPHHAGM PITSPRHAND PVLIALGGAI RRSRRARGIS QEELAHRSAI DRSYMSSIER GGQNPGIVSI ARIAKAMEMS MTELMAEAEL
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