Gene Ajs_1547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1547 
Symbol 
ID4671709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1599827 
End bp1600099 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content61% 
IMG OID639838634 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_985816 
Protein GI121593920 
COG category[K] Transcription 
COG ID[COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0103504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0779138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCATCAT ATCCCCACCA TGCGGGGATG CCCATTACCT CGCCTCGGCA CGCCAACGAC 
CCGGTGCTCA TCGCACTGGG CGGTGCCATT CGCCGCAGCC GGCGCGCGCG AGGCATCTCT
CAAGAAGAAC TCGCACACCG AAGTGCCATT GATCGTTCCT ATATGAGCAG CATCGAACGC
GGCGGCCAGA ATCCCGGGAT CGTCTCGATA GCTCGCATCG CGAAAGCGAT GGAGATGAGC
ATGACCGAAC TGATGGCCGA GGCCGAGTTG TAG
 
Protein sequence
MASYPHHAGM PITSPRHAND PVLIALGGAI RRSRRARGIS QEELAHRSAI DRSYMSSIER 
GGQNPGIVSI ARIAKAMEMS MTELMAEAEL