| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1544 |
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| Symbol | |
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| ID | 4672152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1598008 |
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| End bp | 1598535 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639838631 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_985813 |
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| Protein GI | 121593917 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0439375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.269164 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTGC TTGCCGTATT CATGGTGGCG ATGCTGCCAG CCGCTTCAGC CCTGGCCACG
TGCTGGGACA CGGCGGCGCA ACGCTACGGC ATCGCGCCGG AGTTGCTCTA CGCCGTCGCC
CGTACCGAGT CGAGCCTGAA TCCGCGTGCG GTGAACCGCG CGCATGAGAA GCGCACGGGC
AGCTACGACA TCGGCCTGAT GCAGATCAAT AGCCGGCATC TGTCCCGGCT GGCTGGCTTC
GGCATTCGCG AAGCCGACCT GTACGACCCC TGCGTGAACC TGCAGGTGGG GGCGTGGCTG
ATGGCTGACA GCTTCGCGCG GCACGGCGTC AGCTGGAACG CCGTGGGCGC CTACAACGCA
GCATGCACCC AGCTCAAAGG GGACGCCTGC ACACAGGCCA GAGCCACCTA TGCATGGAAG
GTGTACCGGC ATCTGCCGTC AGCGCGTGGT GTGGATCAGG GTACACGGCA GAAGGCCACC
GCCGTCGTGG CGCAAAGCCA GGGCCTGCGC GTGAGGGTTT CGCCATGA
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| Protein sequence | MRLLAVFMVA MLPAASALAT CWDTAAQRYG IAPELLYAVA RTESSLNPRA VNRAHEKRTG
SYDIGLMQIN SRHLSRLAGF GIREADLYDP CVNLQVGAWL MADSFARHGV SWNAVGAYNA
ACTQLKGDAC TQARATYAWK VYRHLPSARG VDQGTRQKAT AVVAQSQGLR VRVSP
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